Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g3208 ATGGCTTTCTGCATGAGGAAATCCAACACCATCCTCACACTTCTCAAATCCAAGATTCACCTCGCTTCTTCCGCCACCACCTCTCGCCTTCATAATCCGAACAACTCCTTCCCGCTAAATTTCTCGAGCCCCAATGCAATCGCAACAACAAGTATTCTATCTTCCCGCCGATTTGAGTCCACAATAGCGCAACAGCAGTTAAACTCCGTTAACGACGCCGATGACAACCACCACCAGGTGATAGATTTTCCAGGAGGCACAGTGAAATTCACCCCTGAACTGAGGTTTATTTCAGAATCGTCTGAGGAGAGAATACCCTGCTACCGGGTCCTTGATGATAATGGACAACCTATTTTTGGCACTACTTTTGCAAAGGTCAGCGAAGAGGTTGCATTGAAGATGTATAGTGACATGGTTACCCTTCAAATTATGGACACTATCTTCTATGAAGTACAAAGGCAAGGTAGAATATCCTTTTATGTGACAACAACAGGGGAAGAGGCTATCAATATTGCATCAGCTGCAGCACTTAGCATGGATGACCTTATCTTCCCTCAGTATAGAGAACCAGGAGTACTGTTATGGCGAGGATTCACTCTGCAAGAATTTGCAAACCAgtgtttttctaataaatatgATAATGGGAAAGGAAGGCAGATGCCAGCCCATTATGGGTCAAATAAACTCAATTACATTACAGTAGCATCCACAGTTGCTTCACAAATTCCCCATGCTGTTGGAGCTGCATATGCCTTAAAGATGGACAAAAAAGATGCATGTGCTGTCACTTATTTTGGTGATGGTGGCTCAAGTGAGGGAGATTTCCATGCTGCTTTAAATTTTGCAGCTGTCACAGAGTCCCCTGTTATCTTCATTTGTCGAAACAATGGATGGGCTATCAGCACTCCTACTTCAGATCAGTTTAGAAGTGATGGAGTTGTTGTGAAGGGGCGAGCGTATGGAGTCCGTAGTATTCGAGTAGATGGCAATGATGCCTTGGCCATGTATAGTGCTGTCCAAGCTGCACGTGAAATGGCAGTTAGTGAACACAGACCAGTTCTAATTGAGGCCTTAACATATAGATTGGGACACCACTCCACATCAGATGATTCCACCAAATATCGTTGTGCCAATGAGATGGAGCAGTGGAGATTAGCACGAGATCCTGTGTCTAGGTTTAGAAAGTGGATTGAATGGAATGGTTGGTGGAATGATGAGGCTGAATCAGAACTTAGGAAGAATACGAGACAGAAGGTACTGCATGCAATTCAGGTGGCAGAGAAGTTAGATAAGCCTCCACTCGCAGACATATTCAGTGATGTTTATGATGTCCCTCCATCCAACCTCCGCAAACAGGAACAATGGCTGAAAGAGACTATAAGTAGACATCCACAAGATTACCCATCAAATTTGAATCCTCAACTGGGTGGCATATACGAGGAATTAACTAGTAAAGCTTGGTtggtgaaaaggaaaaaaagggcAAAAATGGGGGATAAAATAAACGATACAGATGACAATATAGTGTGCTATGCACCAACAATGATAACCACAAATGGTATATGGCAAGGAGATAACCCTCTGGACtattctctccctctcttcatCTTACAATTAACTCTTGTCGTCGTCGCCACTAGAATCTTCGTCTTCATCCTCAAGCCCTTTCGTCAACCTCGTGTCATTTCTGAAATCTTGGGAGGAGTAATATTGGGCCCTTCAGTACTGGGACGAAACAAAGCCTTCGCAGATGCAATCTTCCCCTTAAGAAGCGTAATGGTAATCGAGACAATGGCAAACGTCGGCCTCCTCTACTTCCTCTTCCTCGTCGGCGTCGAAATGGACCTCAAGGTCATCAAACGCGTCGGCAAGAAAGCCATAGCCACCGCCGTCGCCGGTATGGTCCTCCCTTTCGCCATCGGCGCCGCCTTCTCCTACCTCCTCCACCGCCAGACCGAAGCCGACGTCAACCACGGCACCTACATCCTCTTCCTCGGCGTCGCCCTCTCCGTCACCGCCTTCCCCGTCCTCGCCCGCATCCTCGCCGAGCTCAAATTGATCAACACCGAGCTCGGCCGAATCGCGCTTTCCTCCGCCCTAATCAACGACGTGTGCGCTTGGATCCTCCTAGCCCTCGCCATCGCGCTAGCCGAGAACGAGCAGGCCTCGTTGGCTTCTCTTTGGGTCGTCCTCTCGAGCATCGCGTTCGTAGGGTTCTGCGTTTTCGCGGTGAGGCCCGCCGTTTCGTGGATCATACGGAGGACTCCCGAGGGCGAAACGTTCAGCGACTTCTACATCTGTTTGATCCTCGCGGGGGTTATGATTTCGGGCTTCATCACGGACGCGATTGGGACCCATTCGGTTTTCGGGGCCTTTGTGTTTGGGCTGGCGATTCCGAATGGGCCGCTTGGGGTGACGCTGGTGGAGAAGCTCGAGGACTTCGTGTCTGGGCTTTTGCTCCCTTTGTTCTTTGCCATTAGTGGGCTGAAGACCAATTTGGGGGCCATTCAAGGGACGTCCACGTGGGCCGTTCTAATGTTGGTTATATTTCTGGCATGTATTGGGAAAATTGTGGGCACTATGATTGTGGCTTTCTTTTATCAGATGACAGTACGTGAAGCTGCGGCTCTCGGCTTGCTCATGAATACTAAAGGCCTCGTGGAAATCATTGTGCTTAATGTGGGAAAAGACCAAAAGGTACATACATGCAGGTTTTAG 2718 0.4728 MAFCMRKSNTILTLLKSKIHLASSATTSRLHNPNNSFPLNFSSPNAIATTSILSSRRFESTIAQQQLNSVNDADDNHHQVIDFPGGTVKFTPELRFISESSEERIPCYRVLDDNGQPIFGTTFAKVSEEVALKMYSDMVTLQIMDTIFYEVQRQGRISFYVTTTGEEAINIASAAALSMDDLIFPQYREPGVLLWRGFTLQEFANQCFSNKYDNGKGRQMPAHYGSNKLNYITVASTVASQIPHAVGAAYALKMDKKDACAVTYFGDGGSSEGDFHAALNFAAVTESPVIFICRNNGWAISTPTSDQFRSDGVVVKGRAYGVRSIRVDGNDALAMYSAVQAAREMAVSEHRPVLIEALTYRLGHHSTSDDSTKYRCANEMEQWRLARDPVSRFRKWIEWNGWWNDEAESELRKNTRQKVLHAIQVAEKLDKPPLADIFSDVYDVPPSNLRKQEQWLKETISRHPQDYPSNLNPQLGGIYEELTSKAWLVKRKKRAKMGDKINDTDDNIVCYAPTMITTNGIWQGDNPLDYSLPLFILQLTLVVVATRIFVFILKPFRQPRVISEILGGVILGPSVLGRNKAFADAIFPLRSVMVIETMANVGLLYFLFLVGVEMDLKVIKRVGKKAIATAVAGMVLPFAIGAAFSYLLHRQTEADVNHGTYILFLGVALSVTAFPVLARILAELKLINTELGRIALSSALINDVCAWILLALAIALAENEQASLASLWVVLSSIAFVGFCVFAVRPAVSWIIRRTPEGETFSDFYICLILAGVMISGFITDAIGTHSVFGAFVFGLAIPNGPLGVTLVEKLEDFVSGLLLPLFFAISGLKTNLGAIQGTSTWAVLMLVIFLACIGKIVGTMIVAFFYQMTVREAAALGLLMNTKGLVEIIVLNVGKDQKVHTCRF 905
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g3208 905 SUPERFAMILY Thiamin diphosphate-binding fold (THDP-binding) 107 468 IPR029061 -
Sto3g3208 905 PANTHER 2-OXOISOVALERATE DEHYDROGENASE SUBUNIT ALPHA, MITOCHONDRIAL 54 471 - -
Sto3g3208 905 Pfam Dehydrogenase E1 component 138 432 IPR001017 GO:0016624
Sto3g3208 905 Pfam Sodium/hydrogen exchanger family 541 900 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Sto3g3208 905 Gene3D - 534 903 IPR038770 -
Sto3g3208 905 CDD TPP_E1_PDC_ADC_BCADC 134 426 - -
Sto3g3208 905 PANTHER 2-OXOISOVALERATE DEHYDROGENASE SUBUNIT ALPHA 2, MITOCHONDRIAL 54 471 - -
Sto3g3208 905 Gene3D - 76 472 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g3208 Sto-Chr3 36849952 36857245 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g3208 504 900 Antiporter Super Family AT2G13620 77.078 0.0 587
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g3208 K00166 - jre:108996257 691.804
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g3208 3 36849952 36857245 Sto3g3208 3 36849952 36857245 ECH
Sto3g3208 3 36849952 36857245 Sto4g0280 4 2143525 2154301 ECH