Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g3200 ATGAATCTCCCTTCTCTCGCTCGCTTCTCTGAGCGTCTTCTTGCTCCTCTCTACTCTACGCCTCCTACCAGGAGCCATAATACTGAGAGTATTGCTATTGAAGGGCGTAACCTCAGTTTCTCGTTCGCTTCAAGGCAGGTGAAATTTGTACCCATTCTTCGGGATTGTTCCATTCGCATTCCTTCTGGGCAGTTTTGGATGCTTCTTGGACCCAATGGATGTGGGAAATCTACCCTCTTGAAGATATTGGCTGGTCTTTTAAATCCAACTTCAGGAGAAGTGTGCGTGAAAGGGCCTAAAAGTTTTGTTTTCCAAAATCCAGATCATCAGGTGGTAATGCCAACAGTAGAAGCTGACGTTGCATTTGGTCTTGGTAAGTTCAACCTGACCAACGATGAAGTCAGATCAAGGGTGTCAAGAGCCTTGCATGCTGTGGGCATGTCTGACTACATGCAGAGATCTGTTCAAACTCTAAGCGGTGGTCAGAAGCAGAGGGTTGCCATTGCTGGTGCTCTAGCAGAAGCTTGTAAAGTTCTGTTGTTGGATGAGCTCACTACATTCTTAGATGAAAATGACCAGATGGGGGTTATCAGAGCAGTTAGGAACTCTTTGGATACCTCTGCAGAAGTTACAGCATTGTGGGTGACCCATCGTTTGGAAGAACTAGAGTATGCTGATGGTGCCATCTACATGGAGGATGGGAGAGTTGTGAAGCATGGAGATGCAGCAAGCATAAGAAGTTTCATTGAAGCCAGACAAGCCGCCTATATTGAAGAGATAAATTCTTGA 789 0.4575 MNLPSLARFSERLLAPLYSTPPTRSHNTESIAIEGRNLSFSFASRQVKFVPILRDCSIRIPSGQFWMLLGPNGCGKSTLLKILAGLLNPTSGEVCVKGPKSFVFQNPDHQVVMPTVEADVAFGLGKFNLTNDEVRSRVSRALHAVGMSDYMQRSVQTLSGGQKQRVAIAGALAEACKVLLLDELTTFLDENDQMGVIRAVRNSLDTSAEVTALWVTHRLEELEYADGAIYMEDGRVVKHGDAASIRSFIEARQAAYIEEINS 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g3200 262 PANTHER ABC TRANSPORTER I FAMILY MEMBER 10 24 261 - -
Sto3g3200 262 SMART AAA_5 62 235 IPR003593 -
Sto3g3200 262 Pfam ABC transporter 53 185 IPR003439 GO:0005524
Sto3g3200 262 Gene3D - 28 261 IPR027417 -
Sto3g3200 262 ProSitePatterns ABC transporters family signature. 158 172 IPR017871 GO:0005524
Sto3g3200 262 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 33 258 IPR003439 GO:0005524
Sto3g3200 262 PANTHER ABC TRANSPORTER I FAMILY MEMBER 10 24 261 - -
Sto3g3200 262 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 24 250 IPR027417 -
Sto3g3200 262 CDD ABC_cobalt_CbiO_domain1 34 235 IPR015856 GO:0005524|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g3200 Sto-Chr3 36808703 36811794 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g3200 33 240 Calmodulin-binding Proteins AT2G36910 30.973 1.22e-22 95.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g3200 - - gmx:100813654 424.861
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g3200 3 36808703 36811794 Sto3g3200 3 36808703 36811794 ECH