Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g3179 ATGACTTCATTTCCCAGAAAGCCGTCTTCTTTCTCCAGACCCATTACTttcttctgcttctctctctcgaGAGCCGCTTTCCTCCTCTTTTCCATGGCTTCTCTTCTCTCACTTTCCCTTCTCTccatcttcctcttcctctcccTCTCCTCCGCCGTGCGCCACCATAACCACCATTCTAAAACGtcccctccttcttcttcttcctcctctgtCGTTATCATCCAGAACGCCTGCAAGGCCACGCGTTTCCCTCAACAATGCGAATCCTCCCTCAAGAATCTCCCTCCCAACCCCACACCCATCCAAATCCTCCAATCCGCCATGTCCGTCTCCTCCGAAAACCTCAAAACCGCTCAATCCATGGTCAAATCCATCCTCGATTCCTCCGCCTCCAACCTCAACCGCTCCACCGCCGCCAGAATCTGCGCCGAGGTCCTCCACAACTCCGATTACCGCATCGGCCTCGCCAACGACGCACTGCCACGTGGCCGCACCAAGGACGCCCGCGCGTGGCTGAGCTCCTCCGTCGTCTACCAGTACGATTGCTGGTCCGCCCTCAAATACGCCAACGATACTCAAATGGTGAGCGACACCATGGCCTTCTTGGACTCCCTCATTGCGCTCTCCAGCAACGCCTTGAGCATGGTCGCCTCCTACGGCGTCTTCGGGAACGATACGGCGTCGTGGAGGCCGCCCCAAACGGAGCGCGATGGGGTCTGGGAGGTGGATTCTTCGCCCGGGTCGGGTTCCGGATCCGGGTTGGCGTTTCGGGGCGGGTTTCCGACGAAGGTGAAGCCGGATGCGACGGTGTGTAAGAACGGTGGGAGTGGGTGTTATAAGACGGTGCAGGAAGCGGTTGATGCGGCTCCGGATAACGCCGGCGGCGGCGAGAACAGgtttgtgatatatataaaggaaggcGTTTATGAGGAGAGGGTGAGTGTGCCGTTAGAGAAGAAGAATTTGGTGTTTTACGGTGATGGAATGGGTAAGACCGTCATTACTGGGTCTGCGTTCTCGGGTCAACCCGGTGTGACCACGTACACCTCAGCCACAGTTGCGGTTATGGGTGATGGATTCATGGCGAAAGATCTGACAATCCAGAACACAGCAGGTCCTGATGCTCATCAAGCAGTGGCCTTAAGATCAGACAGTGATCTCTCTGTGTTTGAGAACTGTGAATTCTTAGGCAACCAAGATACTCTCTATGCTCACTCTCATCGCCAGTTTTACAAATCGTGCCGCATCCTCGGCAACGTCGACTTCATCTTCGGGAATTCAGCTTCCATTTTCCAAGATTGTCAAATCCTAGTCCGACCCCGGCAAGTCAAACCCGAAAGCGGCGAGAACAACGCCGTGACTGCCCATGGCAGGACAGACCCTGCTCAGTCAACTGGCTTTGTGTTCCAAAACTGCTTGATTAATGGTACTGAGGAATACATGGTTTTGTACTATAGCAAGCCTCAGAAACACAGGAACTTCTTGGGGAGGCCATGGAAGGAGTATTCTAGAACAGTTTTCATTCATTCTTTCTTGGAAGTTCTGATAACACCCACCGGTTGGATGCCGTGGAGTGGCGATTTCGCGCTCAAGACACTCTTCTACGGAGAATTCGAGAATTCAGGACCTGGTTCTAATTTGTCTCAGAGAGTGGAATGGAGTAGCCAGATCCCACCTGAGCATGTGTTCACATATTCAGTGCAGAATTTCATACAAGGAGATGAGTGGATTCCACCAACTCTTATTAGCTCATTAGATTTATCATAG 1770 0.5023 MTSFPRKPSSFSRPITFFCFSLSRAAFLLFSMASLLSLSLLSIFLFLSLSSAVRHHNHHSKTSPPSSSSSSVVIIQNACKATRFPQQCESSLKNLPPNPTPIQILQSAMSVSSENLKTAQSMVKSILDSSASNLNRSTAARICAEVLHNSDYRIGLANDALPRGRTKDARAWLSSSVVYQYDCWSALKYANDTQMVSDTMAFLDSLIALSSNALSMVASYGVFGNDTASWRPPQTERDGVWEVDSSPGSGSGSGLAFRGGFPTKVKPDATVCKNGGSGCYKTVQEAVDAAPDNAGGGENRFVIYIKEGVYEERVSVPLEKKNLVFYGDGMGKTVITGSAFSGQPGVTTYTSATVAVMGDGFMAKDLTIQNTAGPDAHQAVALRSDSDLSVFENCEFLGNQDTLYAHSHRQFYKSCRILGNVDFIFGNSASIFQDCQILVRPRQVKPESGENNAVTAHGRTDPAQSTGFVFQNCLINGTEEYMVLYYSKPQKHRNFLGRPWKEYSRTVFIHSFLEVLITPTGWMPWSGDFALKTLFYGEFENSGPGSNLSQRVEWSSQIPPEHVFTYSVQNFIQGDEWIPPTLISSLDLS 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g3179 589 CDD PMEI-like_3 78 220 - -
Sto3g3179 589 TIGRFAM PME_inhib: pectinesterase inhibitor domain 40 217 IPR006501 GO:0004857
Sto3g3179 589 PANTHER PECTINESTERASE 55 581 - -
Sto3g3179 589 Pfam Plant invertase/pectin methylesterase inhibitor 74 216 IPR006501 GO:0004857
Sto3g3179 589 Pfam Pectinesterase 268 575 IPR000070 GO:0030599|GO:0042545
Sto3g3179 589 Gene3D Invertase/pectin methylesterase inhibitor family protein 73 219 IPR035513 -
Sto3g3179 589 Gene3D - 262 586 IPR012334 -
Sto3g3179 589 SUPERFAMILY Pectin lyase-like 266 583 IPR011050 -
Sto3g3179 589 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 74 218 IPR035513 -
Sto3g3179 589 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 55 581 - -
Sto3g3179 589 SMART PMEI_2 70 216 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g3179 Sto-Chr3 36644291 36646837 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g3179 62 577 Carbohydrate Esterase AT5G09760 65.896 0.0 708
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g3179 - - csv:101221165 800.816
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g3179 3 36644291 36646837 Sto3g3179 3 36644291 36646837 ECH