Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g3157 ATGGTGGAAAACTCGAGTTTACCGGAAGATTCCATCAAAACCCACCACGCACTGCAGGAGGGTTTCGGTGGGCCTGTCTCCGATGGCTTTAAAGGCGAACACGCGGTCGTCTCCGGCGACTCCGGTGGCCGGTGGCCGCCGGAGGAGACTATGGCTTTGCTGAAGATAAGGTCTGACATGGATGTTGCTTTCAGAGATTCAACCCCCAAAGCTCCTCTTTGGGAACAAGTTTCAAGGAGGCTAGAGGAGTTAGGATACAACAGAAATGCGAAGAAATGCAAGGAGAAGTTTGAAAACATTTACAAGTACCATAGAAGGACCAAGGAAGGTCGTTTTGGCCGATCCAATGGCAAGACTTACAGATTCTTTGAGCAATTAGAGTCTCTCCTAATTCCATCTTCTTTAGAAAAAACTCAGGGACAACTGGAAAACACTGAAAAATCTACAACCCCAATGGATGTATCAGATGTTATTCAGGATGCAATGCCGTGCTCGATCCGATTCCCTTGTGATCCTTCTAGTTCAACCACTTCCTCTTCCAGCAAAGAACCAATCAGGAGCGAAAAcatgggaaagaagaagaggaaaatgACACAGTTTTTTGAAAGTTTGATGAAAGAAGTGACGGAAAAGCAAGAGAAGCTGCAGAAGAACTTTATGGAGATGTTAGAAAAATGTGAACAAGATCGAATAGCGAGAGAGGAAGCTTGGAAGATGCAAGAATTGGCTAGGATTAAGAGGGACCGCGAGCTTTTGGCTCAAGAAAGATCAATTGCAGCAGCAAAAGATGCTGCTGTGCTTGCCTTTCTCAAGAAGTTCACAGAACAAGAAGGTTCATTGCAATTTCCTGAAAACGTCCCAACAATCCCAAGTGATAAAGAGAACGATGAACAAGACAATGTCAATGATCATGGAGGCAATAGTATCATAAAAGATAAGCAAGAGTGTGGAAATGGTGGGAATTTCACACTGATGAGTTCATCATCCTCCCGATGGCCtaaagatgaagtggaagctttgATTAGATTGAGGacaaattttgatgttgagtatgaaggaaatggacctaaaggATCTCTATGGGAGGAGATATCTAATGCAATGAAAAAGCTTGGGTATGATCGGAGTGCCAAGAAATGCAAAGAGAAATGGGAGAATATGAATAAATACTTTAAGAGGATGaaggagaaaaacaaaaaaaagcctGATGATTCTAAGACATGTCCTTATTTTCACCAGCTGGATGCTCTGTACAGTGAAAAGCCTAAGAAGGTGGACGAATCAGCAAGTTCTGATAAGGATCAAATGAAACCTGAGGAGCTACTAATGCATATCATGGGAGGTCAATCATCATCTGAAGATGCTGACATGGAGAAGGAGGATCAGAATCAGATTGAAGGAGGTAGTGCTAGTTAA 1416 0.4004 MVENSSLPEDSIKTHHALQEGFGGPVSDGFKGEHAVVSGDSGGRWPPEETMALLKIRSDMDVAFRDSTPKAPLWEQVSRRLEELGYNRNAKKCKEKFENIYKYHRRTKEGRFGRSNGKTYRFFEQLESLLIPSSLEKTQGQLENTEKSTTPMDVSDVIQDAMPCSIRFPCDPSSSTTSSSSKEPIRSENMGKKKRKMTQFFESLMKEVTEKQEKLQKNFMEMLEKCEQDRIAREEAWKMQELARIKRDRELLAQERSIAAAKDAAVLAFLKKFTEQEGSLQFPENVPTIPSDKENDEQDNVNDHGGNSIIKDKQECGNGGNFTLMSSSSSRWPKDEVEALIRLRTNFDVEYEGNGPKGSLWEEISNAMKKLGYDRSAKKCKEKWENMNKYFKRMKEKNKKKPDDSKTCPYFHQLDALYSEKPKKVDESASSDKDQMKPEELLMHIMGGQSSSEDADMEKEDQNQIEGGSAS 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g3157 471 MobiDBLite consensus disorder prediction 168 194 - -
Sto3g3157 471 MobiDBLite consensus disorder prediction 19 44 - -
Sto3g3157 471 MobiDBLite consensus disorder prediction 282 315 - -
Sto3g3157 471 CDD GT1 330 391 - -
Sto3g3157 471 PANTHER TRIHELIX TRANSCRIPTION FACTOR GT-2-LIKE 1 462 - -
Sto3g3157 471 CDD GT1 44 108 - -
Sto3g3157 471 MobiDBLite consensus disorder prediction 290 310 - -
Sto3g3157 471 Gene3D - 332 393 - -
Sto3g3157 471 Gene3D - 45 106 - -
Sto3g3157 471 MobiDBLite consensus disorder prediction 419 471 - -
Sto3g3157 471 SUPERFAMILY Homeodomain-like 329 398 IPR009057 -
Sto3g3157 471 PANTHER - 1 462 - -
Sto3g3157 471 MobiDBLite consensus disorder prediction 419 440 - -
Sto3g3157 471 Coils Coil 205 225 - -
Sto3g3157 471 ProSiteProfiles Myb-like domain profile. 43 101 IPR001005 -
Sto3g3157 471 MobiDBLite consensus disorder prediction 169 185 - -
Sto3g3157 471 ProSiteProfiles Myb-like domain profile. 330 388 IPR001005 -
Sto3g3157 471 SMART sant 328 390 IPR001005 -
Sto3g3157 471 SMART sant 41 103 IPR001005 -
Sto3g3157 471 Pfam Myb/SANT-like DNA-binding domain 330 417 IPR044822 -
Sto3g3157 471 Pfam Myb/SANT-like DNA-binding domain 44 129 IPR044822 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g3157 Sto-Chr3 36433943 36435746 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g3157 39 423 Trihelix Transcription Factor Family AT1G76880 47.640 8.64e-123 369
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Sto3g3157 Myb_DNA-bind_4 2.4e-22 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g3157 - - zju:107425531 497.278
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g3157 3 36433943 36435746 Sto3g3157 3 36433943 36435746 ECH
Sto3g3157 3 36433943 36435746 Sto4g0323 4 2508365 2510192 ECH