Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g3154 ATGATGAAGAATCCGTATTTGGTAGTGATAGTGATTCAAGCCATTTATGCTGGAATGTTCTTGATTTCTAAAGCTGCCTTCGATCATGGAATGAACAATTTCATCTTCGTCTTCTATAGACAGGCTTTTGCTACTATCTTCCTCCTCCCTTTCGCTTTCTTCTTCCAAtgGAAATCAAGTGCGCCACCTTTATCATTCATCACCTTCTGCaagattttctttctttccttgtgTGGaaTAACTTTGAGCTTGGACATATATGGCGTTGCTCTTGTGTACACTTCAGCCACTTTGGCTTCTGCTACTTCAAACTGCACTCCAGTCATCACTTTCTTATTGGCCCTCCTGCTCagGATTGAAGTGTTGAAATTGAGAACAAGTGGTGGAATAGCAAAGTTAGTGGGAATAGTGGCATGTTTGGGTGGTGCTGCAATTCTTGCCTTTTACAAAGGTCCCCATTTGGAAGCATTTATAAAGCATCATCATAATAATACTAGTTTAGGGTACCCTAATAATCAAggtcatcatcttcttcaacaATCCCATACTACTACTACATGGATCAAGGGTTGCTTCCTCATGCTTCTTGCCAATGTCTGTTGGGGCCTCTGGCTCGTCCTCCAGACATTTGTTATAAAGGAGTACCCTTCAAAGCTGCTTCTCACAACTCTACAATGCTTGTTGAGCTGTATTCAGTCATTTGCGATTGCTTTTGGCGTAGAAAGGGACATGCACCAATGGAAGTTGGCTTGGAATATCAGACTCCTCGCCGTAGCTtattgtGGAATAATGGTGACGGGTGTCACGTTCTACTTACAAGCATGGGTTATAGAGAAGAAAGGACCTGTGTTCTTGGCCATGACAAACCCACTCTCTCTTATAATTACTATTATCTCTTCAGCAATTCTTATAGGCGAGGTTATCAGTTTGGGaagCATTATAGGAGGGTTGGTAATGGTCGTGGGACTGTATAGCGTGCTGtggggaaagaagagagagcaACTCATAGCCAAACACGCCGTTGACTTGGAGCACAACCTACAATCGCCTCATCACATTCTAAGTACTCGAGCTCATCAACCCACTAGTGTGGTTCCATAG 1101 0.4024 MMKNPYLVVIVIQAIYAGMFLISKAAFDHGMNNFIFVFYRQAFATIFLLPFAFFFQWKSSAPPLSFITFCKIFFLSLCGITLSLDIYGVALVYTSATLASATSNCTPVITFLLALLLRIEVLKLRTSGGIAKLVGIVACLGGAAILAFYKGPHLEAFIKHHHNNTSLGYPNNQGHHLLQQSHTTTTWIKGCFLMLLANVCWGLWLVLQTFVIKEYPSKLLLTTLQCLLSCIQSFAIAFGVERDMHQWKLAWNIRLLAVAYCGIMVTGVTFYLQAWVIEKKGPVFLAMTNPLSLIITIISSAILIGEVISLGSIIGGLVMVVGLYSVLWGKKREQLIAKHAVDLEHNLQSPHHILSTRAHQPTSVVP 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g3154 366 PANTHER WAT1-RELATED PROTEIN 6 337 - -
Sto3g3154 366 SUPERFAMILY Multidrug resistance efflux transporter EmrE 247 332 - -
Sto3g3154 366 SUPERFAMILY Multidrug resistance efflux transporter EmrE 39 150 - -
Sto3g3154 366 PANTHER WAT1-RELATED PROTEIN 6 337 IPR030184 GO:0016021|GO:0022857
Sto3g3154 366 Pfam EamA-like transporter family 5 144 IPR000620 GO:0016020|GO:0016021
Sto3g3154 366 Pfam EamA-like transporter family 189 327 IPR000620 GO:0016020|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g3154 Sto-Chr3 36414112 36417648 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g3154 3 261 Nodulin-like Gene Family AT5G64700 60.385 1.63e-96 286
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g3154 - - gmx:100775854 478.404
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g3154 3 36414112 36417648 Sto3g3154 3 36414112 36417648 ECH
Sto3g3154 3 36414112 36417648 Sto4g0326 4 2528505 2531640 ECH