Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g3127 ATGGGAGTTCTTAATTCATCTTCTGATGAGTTCATCATATCTGATTTTCTGATGCTGGATGAAGATTATTATGATGAAGATTACTGTTGTAATAATTGGTCACAACAAAGTACGGAAGAATCATCGGAGAAGACAACCACAACCAGTGATGCTACTGCTGGATTAATAAGTGGTGCAACATCATCCCACAATCGTCATAACATAAAAAGTGAAGATGGAGttaagggaaagaaaaaagaagaaaagcaaAGGGTGGGATTTAGAACGAGATCGGAGGTTGATGTTTTGGATGATGGATACAAATGGAGGAAGTACGTAAAGAAATCTGTCAAGAGTAATCCCCATCCAAGGAACTACTACAAGTGTTCAAGTGAAGGATGCAAAGTGAAGAAAAGAGTGGAAAGGGATAAAGATGACTCAAGCTATGTGATCACAAGTTATGAAGGCACACACAATCATGAAACTCCACTTTCACACTATTGCTCCCAAATCCCCACCTTTGTGCATTCTAATTCTCACTCATCATTATCTTCCTAG 537 0.3687 MGVLNSSSDEFIISDFLMLDEDYYDEDYCCNNWSQQSTEESSEKTTTTSDATAGLISGATSSHNRHNIKSEDGVKGKKKEEKQRVGFRTRSEVDVLDDGYKWRKYVKKSVKSNPHPRNYYKCSSEGCKVKKRVERDKDDSSYVITSYEGTHNHETPLSHYCSQIPTFVHSNSHSSLSS 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g3127 178 Pfam WRKY DNA -binding domain 97 154 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto3g3127 178 Gene3D WRKY domain 83 149 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sto3g3127 178 PANTHER WRKY TRANSCRIPTION FACTOR 50-RELATED 6 161 - -
Sto3g3127 178 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 6 161 IPR044810 GO:0003700
Sto3g3127 178 SMART WRKY_cls 96 155 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto3g3127 178 MobiDBLite consensus disorder prediction 65 88 - -
Sto3g3127 178 ProSiteProfiles WRKY domain profile. 91 156 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto3g3127 178 MobiDBLite consensus disorder prediction 34 88 - -
Sto3g3127 178 SUPERFAMILY WRKY DNA-binding domain 88 156 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sto3g3127 178 MobiDBLite consensus disorder prediction 34 64 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g3127 Sto-Chr3 36034366 36038025 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g3127 8 178 WRKY Transcription Factor Family AT5G64810 47.826 9.91e-40 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Sto3g3127 WRKY 2e-21 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g3127 - - gmx:100127396 154.836
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g3127 3 36034366 36038025 Sto3g3127 3 36034366 36038025 ECH