Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g3122 ATGGACTTGGCGGCGAAGCTTCATCACCTCGAGCTCAGTTCTAGCTTCCTCACCGGCTCAGTCATTTTGGACACGAGAAAAGCCGCTATACGGCCGTGCGTTTGGCCAGCTTCAAATCGTTCGGTTTCTCAAACCCTTAGAGGTAACGCTAATTTGAAGCTGGTTAAGGAGCGTCGAATTTTTAGAAGAGCGAGTTCTAGTATTGCTGCTAGTTCATCTGCGGTTGCCGTCGAGACATcggcggcggcggtggaggAAGGAACCACGACCAAAGAGGACATCGAGTCTTTGTTTTCGAACTCCTCGGTCGATGAATTTGAGAATAGACGCGGGAATAGGCAATCGAATACGGGTGCTTCGAGCATTTCGTCTGGCGTTAGGTTGGAAAATGTGACCAAAAGCTACAAGGGTGTCACTGTGTTGAAAGATATTACTTGGGAAGTGAAAAAGGGAGAAAAAGTGGGATTGGTTGGTGTAAATGGTGCGGGGAAGACAACGCAGATGAGGATTATTGCTGGTCAGGAGGAGCCAGACTCGGGGAATGTGATCAAAGCCAAATCAAATATGAAAATTGCATTTCTGAGTCAAGAATTTGAGGTATCTCTTAGTAGGACGGTGAGGGAGGAATTTCTGAATGCATTTAAAGAGGAAATGGAGATAGCAGGGAAGTTAGAGAAGGTGCAGAAGGCACTTGAGGGTTCTGTGAACGATTTAGATTTGATGGGGAGGCTTTTAGACGAGTTTGATTTGCTTCAGAGGAAGGCCCAGGCAGTAAACTTGGATGTAGTAGATGCAAAGGTAAGTAAATTGATGCCAGAACTTGGGTTTGCTCCTGAGGATTCAGACAGGTTGGTGGCTTCATTTAGTAGTGGATGGCAGATGAGGATGTCTCTTGGGAAGATTTTACTTCAGGAGCCAGATTTATTACTGTTGGATGAACCCACAAATCACCTTGACCTTGACACCATTGAGTGGCTTGAAGGCTATCTTAACAAGCAGGATGTGCCAATGGTTATCATTTCCCATGACAGAGCTTTTCTCGATCAACTGTGTACAAAAATTGTGGAAACTGACATGGGTGTGTCCAGAACGTATGAGGGAAATTATTCCCAGTTCATACTTTCAAAGGCAGCATGGATTGAATCACAGTATGCTGCATGGGAAAAGCAGCAGAAAGAAATTGAACAGACAAAAGATTTGATAACCAGGTTAGGTGCTGGAGCAAATTCTGGCCGTGCTTCAACTGCTGAGAAGAAGCTGGAGAGACTTCAGGAAGAGGAACTAGTAGAGAAGCCATTTCAACGGAAACAAATGAAAATAAGGTTCCCTGAGCGTGGGAGGAGTGGAAGATCCGTTGTAGCAATTAAGAATTTGGAATTTGCCTTTGAGGATAAGGTGCTTTTCAAAAACGCAAATCTTTCAATTGAAAAGGGAGAAAAAATTGCCATTATTGGTCCAAATGGGTGTGGCAAGAGTACTTTGCTTAAACTGATAATGGGTTTAGAGAAGCCAATTGGAGGTGAAGTTGTGCTTGGAGAGCATAATGTATTACCCAACTATTTTGAACAAAATCAGGCTGAGGCACTTGATCTGGACAAGACAGTGCTTGAGACAGTAGAAGAAGCTGCTGAAGACTGGAGGATTGATGATATTAAAGGACTTCTTGGGCGTTGTAATTTCAAATCTGATATGCTTGACCGGAAAGTTTCTCTATTGAGTGGTGGGGAGAAGGCACGTCTGGCATTCTGCAAATTTATGGTAAAACCATCAACTCTTCTTGTTTTGGATGAACCAACCAATCATTTGGATATACCTTCTAAAGAAATGCTTGAGGAAGCAATAACTGAATACAAGGGCACTGTTATTACAGTGTCTCATGATCGATACTTCATAAAGCAGATAGTTAATAGAGTGATAGAAGTTAAAGATGGAGCTTTACAGGATTATGCAGGCGACTACAATATTTCTAACATGTCTGAGTCTAAAAAAATGCAGTATTATTTGGAGAAGAATCTTGATGCCAGGGCCAGAGAGCTTGAACGTGAGGCAGAGCTTGACGATAAAGCTCCAAAAGTAAAAGCCAAATCCAAGATGTCAAAGGCTGAGAAAGAAGCACGGAAGAAACAGAAGATGCAGGCTTTTCAGGCAGCAAAGCAGAAGTCCAAAGATGTCATGTATGAGGCTGCAATGACCTTCTGA 2199 0.4256 MDLAAKLHHLELSSSFLTGSVILDTRKAAIRPCVWPASNRSVSQTLRGNANLKLVKERRIFRRASSSIAASSSAVAVETSAAAVEEGTTTKEDIESLFSNSSVDEFENRRGNRQSNTGASSISSGVRLENVTKSYKGVTVLKDITWEVKKGEKVGLVGVNGAGKTTQMRIIAGQEEPDSGNVIKAKSNMKIAFLSQEFEVSLSRTVREEFLNAFKEEMEIAGKLEKVQKALEGSVNDLDLMGRLLDEFDLLQRKAQAVNLDVVDAKVSKLMPELGFAPEDSDRLVASFSSGWQMRMSLGKILLQEPDLLLLDEPTNHLDLDTIEWLEGYLNKQDVPMVIISHDRAFLDQLCTKIVETDMGVSRTYEGNYSQFILSKAAWIESQYAAWEKQQKEIEQTKDLITRLGAGANSGRASTAEKKLERLQEEELVEKPFQRKQMKIRFPERGRSGRSVVAIKNLEFAFEDKVLFKNANLSIEKGEKIAIIGPNGCGKSTLLKLIMGLEKPIGGEVVLGEHNVLPNYFEQNQAEALDLDKTVLETVEEAAEDWRIDDIKGLLGRCNFKSDMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAITEYKGTVITVSHDRYFIKQIVNRVIEVKDGALQDYAGDYNISNMSESKKMQYYLEKNLDARARELEREAELDDKAPKVKAKSKMSKAEKEARKKQKMQAFQAAKQKSKDVMYEAAMTF 732
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g3122 732 Coils Coil 691 720 - -
Sto3g3122 732 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 433 663 IPR027417 -
Sto3g3122 732 PANTHER ATP-BINDING TRANSPORT PROTEIN-RELATED 82 721 - -
Sto3g3122 732 Pfam ABC transporter 355 442 IPR032781 -
Sto3g3122 732 Gene3D - 415 682 IPR027417 -
Sto3g3122 732 PANTHER ABC TRANSPORTER F FAMILY MEMBER 5 82 721 - -
Sto3g3122 732 MobiDBLite consensus disorder prediction 681 710 - -
Sto3g3122 732 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 126 384 IPR003439 GO:0005524
Sto3g3122 732 ProSitePatterns ABC transporters family signature. 572 586 IPR017871 GO:0005524
Sto3g3122 732 Gene3D - 122 407 IPR027417 -
Sto3g3122 732 SMART AAA_5 477 645 IPR003593 -
Sto3g3122 732 SMART AAA_5 150 360 IPR003593 -
Sto3g3122 732 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 127 369 IPR027417 -
Sto3g3122 732 CDD ABCF_EF-3 455 644 - -
Sto3g3122 732 ProSitePatterns ABC transporters family signature. 288 302 IPR017871 GO:0005524
Sto3g3122 732 CDD ABCF_EF-3 126 356 - -
Sto3g3122 732 Pfam ABC transporter 141 316 IPR003439 GO:0005524
Sto3g3122 732 Pfam ABC transporter 469 600 IPR003439 GO:0005524
Sto3g3122 732 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 453 668 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g3122 Sto-Chr3 35997617 36002916 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g3122 450 643 Calmodulin-binding Proteins AT2G36910 26.728 3.53e-12 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g3122 - - adu:107470294 1069.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g3122 3 35997617 36002916 Sto3g3122 3 35997617 36002916 ECH