Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g3070 ATGCTTCAAATGTTGTGCCCTTCAACTTCTCATGAGTCATATCAGTCTCTTGTGTATTTCACATTTCATGAGACCATCTTATCCTCCGAATCGGAGGAGTTGAAGCAGCAGCCGGACCTTGAGAAAAACGCAAGGTCCGAATGGGTTCTGAATGCTCCTGAACCGCCCAGTCTTTGGCGACAGTTTTCAGATTCCGTTGCCAAAACCATTTCCCACCGCCGCCACAAGCTTTCCTCTCTCACTCACCAATCCCCACCCATCGTTCTTCTCTCTGTCTTGCAGAGGATTTTCCCCATTCTTCATTGGGCAAGAAACTATAATCTCACCAAATTCCGCTGCGATTTGCTTGCTGGCCTTACTATTGCTAGCCTCTGCATTCCTCAGAGCATTGGGTATGCGACCTTGGCACACTTGGATCCTCAATATGGCCTGTATACGAGTGTTGTGCCACCTCTGATATATGCTGTAATGGGGAGTTCAAGAGAGATAGCAATAGGACCTGTGGCTGTGGTTTCACTTCTTATATCTTCAATGGTTCAGAAGTTGATAGATCCTGCTTCCGATCCTCTTGCTTATACTAAGCTTGTTCTGACCACCACACTCTTTGCTGGTATCTTTCAAGCTGCTTTCGGAATCTGCAGGCTGGGGTTTCTTGTGGATTTTCTGTCGCATGCTGTTATAGTTGGATTCATGGGAGGAGCAGCCATTGTGATTGGTCTTCAGCAGTTGAAGGGACTGTTTGGTATTTCTCATTTTACCAACAAAACCGACATTATCTCTGTCCTCCAAGCTGTCTACAATTCATTTCATCATCCTTGGAATCCTCGTAATTTTATCCTTGGATCCTCGTTCTTGATCTTCATTCTATCAACAAGATTTGTGggtaaaaggaagaagaagctgTTCTGGTTGGCAGCAATATCTCCTCTGATATCAGTGATAGTATCAACTGTAATAGTATTTGTGACAAGAGCTGATAAACATGGAGTTAATATTGTGAAACACGTTAAGGGAGGTTTGAATCCATCCTCAATCCATATGTTAGACTTCAATACTCCCTATATTGCTGAAGTCGCCAAAATTGGATTAGTTGTTGCTCTTATTGCCCTCACTgaaTCAGTTGCTGTTGGGCGATCTTTTGCTTCTATGAAAGGATACCACCTTGATGGCAACAAAGAAATGGTTTCAATAGGTTTCACCAACATTATTGGTTCTTTGACTTCCTGCTACGTAGCAACtggtTCATTCTCCCGTACGGCGGTAAATTTCGCCGCTGGTTGTGAAACTCTAGTGTCGAACATTGTGATGGCGATTACAGTATTGATTTCGCTTCAATTCCTGACGAAACTATTGTATTACACTCCAACTGCAATACTTGCTTCAATAATCCTCTCTGCTCTTCCTGGACTCATTAATGTCTCTGAAGCTCACAAAATATGGAAGGTGGATAAGCTTGACTTTCTGGCTGCCGCCGCCGCCTTCTTCGGCGTTCTCTTCGCCTCCGTCGAGATCGGTCTCCTCTTAGCGGTGGTGATATCATTTTCAAAGATCATTGTAATCTCAATCCGACCTGGTACAGAAACTCTAGGAAAGCTTCCTGGTACTGAAATGTTCTGTGATGTTCGCCAATATCCTATGGCTGTGAAGCCTCCTGGGGTTCTAATCCTACGTCTCAAATCTGCTCTCCTTTGCTTTGCAAATGCCACTTTCGTTAGAGAaagGATCATGAAATGGGTAGCACAGGAAGAATCAGAGGATGACAAGGGAAATAGCACAAGGACCATTCACCTCGTAATTCTCGACGTATCcaATTTGGTGAACATTGACACCTCTGGAATTGCTGCTCTAGAGGAACTGCATAAGACTTTGGTCTCACAAGGGAAGCAGTTAGCAATTGCGAGTCCGACGTGGGAAGTAATTCACAAGCTGAAGGCAGCAAAGTTTATCAGCAAAATGAGTGGAAGGCTCTTCTTAACTGTTGCTGAAGCTGTTGGGTGCAAGTCCGAGtgctaa 2013 0.4347 MLQMLCPSTSHESYQSLVYFTFHETILSSESEELKQQPDLEKNARSEWVLNAPEPPSLWRQFSDSVAKTISHRRHKLSSLTHQSPPIVLLSVLQRIFPILHWARNYNLTKFRCDLLAGLTIASLCIPQSIGYATLAHLDPQYGLYTSVVPPLIYAVMGSSREIAIGPVAVVSLLISSMVQKLIDPASDPLAYTKLVLTTTLFAGIFQAAFGICRLGFLVDFLSHAVIVGFMGGAAIVIGLQQLKGLFGISHFTNKTDIISVLQAVYNSFHHPWNPRNFILGSSFLIFILSTRFVGKRKKKLFWLAAISPLISVIVSTVIVFVTRADKHGVNIVKHVKGGLNPSSIHMLDFNTPYIAEVAKIGLVVALIALTESVAVGRSFASMKGYHLDGNKEMVSIGFTNIIGSLTSCYVATGSFSRTAVNFAAGCETLVSNIVMAITVLISLQFLTKLLYYTPTAILASIILSALPGLINVSEAHKIWKVDKLDFLAAAAAFFGVLFASVEIGLLLAVVISFSKIIVISIRPGTETLGKLPGTEMFCDVRQYPMAVKPPGVLILRLKSALLCFANATFVRERIMKWVAQEESEDDKGNSTRTIHLVILDVSNLVNIDTSGIAALEELHKTLVSQGKQLAIASPTWEVIHKLKAAKFISKMSGRLFLTVAEAVGCKSEC 670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g3070 670 Pfam STAS domain 544 663 IPR002645 -
Sto3g3070 670 Gene3D STAS domain 523 669 IPR036513 -
Sto3g3070 670 PANTHER SULFATE TRANSPORTER 2.2 43 665 IPR030315 GO:0008272|GO:0015116
Sto3g3070 670 PANTHER SULFATE TRANSPORTER 43 665 IPR001902 GO:0015301|GO:0016020|GO:0055085
Sto3g3070 670 Pfam Sulfate permease family 111 492 IPR011547 GO:0016021
Sto3g3070 670 CDD STAS_SulP_like_sulfate_transporter 544 658 - -
Sto3g3070 670 ProSiteProfiles STAS domain profile. 563 667 IPR002645 -
Sto3g3070 670 ProSitePatterns SLC26A transporters signature. 140 161 IPR018045 GO:0008271|GO:0008272
Sto3g3070 670 TIGRFAM sulP: sulfate permease 98 654 IPR001902 GO:0015301|GO:0016020|GO:0055085
Sto3g3070 670 SUPERFAMILY SpoIIaa-like 548 664 IPR036513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g3070 Sto-Chr3 35540525 35551096 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g3070 7 664 Inorganic Solute Cotransporters AT5G10180 66.161 0.0 893
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g3070 K17469 - gmx:100817831 1011.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g3070 3 35540525 35551096 Sto3g3070 3 35540525 35551096 ECH