Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g3033 ATGGGAAGATCTCCATGCTGCGACGAGAGTAGTGGTCTGAAGAAAGGGCCTTGGACTCCCGAAGAAGACCAAAAGCTCGTTGACTACATCCACCAAAACGGCCATGGAAGCTGGAGGGCTCTCCCCAAACTAGCCGGGCTGAACAGGTGTGGGAAAAGTTGCAGGCTAAGATGGACCAATTACTTGAGGCCGGACATCAAGAGAGGAAAATTCTCTCAAGAAGAAGAACACACTATTCTCAATCTCCATGCCGTACTGGGAAACAAATGGTCAGCAATTGCGAGCCACTTACCAGGTCGGACTGATAATGAAATAAAGAACTTCTGGAACACTCATTTGAAAAAGAAGCTGATTCAAATGGGTTATGATCCCATGACTCACCAGCCTCGAACTGACACTATCTTCTCCTCCTCAGCCTTCCCTAATCTCATTTTTGCCCTCGCCAATCTCAAACAATTACTTTTAGATCCCAATATTAATtaccataataataataatattaatatttcttcTTCTGCTGCTCCCTCCTTTCCGTTACAACAAACTCCGTTTCTCGACGGAACCACCGTTAACGTTAACGACTATGACTActacttcaataataataataatgtgtgTTTCTCTCACATGCCTCCGTTAATTACGACgccgtcttcttcttcttctactgcCTATCAAATCCCACAAGATGCCACTAATGATGGTTTGATGATGAATACGACGTCGTATAATGTGGGTGCCGTCGGGGATGGCTGCAGTGGCAGTGCTTGTAATTTTGGGGAAGTTTTGGGTCAATCTGCTATTTGGTGTGATGATGATCGTGATCACTCCGATCTCTTCCTAGAGGAGCCTTTGTTATTCCATGATATTCCATAA 876 0.4132 MGRSPCCDESSGLKKGPWTPEEDQKLVDYIHQNGHGSWRALPKLAGLNRCGKSCRLRWTNYLRPDIKRGKFSQEEEHTILNLHAVLGNKWSAIASHLPGRTDNEIKNFWNTHLKKKLIQMGYDPMTHQPRTDTIFSSSAFPNLIFALANLKQLLLDPNINYHNNNNINISSSAAPSFPLQQTPFLDGTTVNVNDYDYYFNNNNNVCFSHMPPLITTPSSSSSTAYQIPQDATNDGLMMNTTSYNVGAVGDGCSGSACNFGEVLGQSAIWCDDDRDHSDLFLEEPLLFHDIP 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g3033 291 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Sto3g3033 291 Pfam Myb-like DNA-binding domain 15 62 IPR001005 -
Sto3g3033 291 Pfam Myb-like DNA-binding domain 68 113 IPR001005 -
Sto3g3033 291 Gene3D - 70 117 - -
Sto3g3033 291 ProSiteProfiles Myb-like domain profile. 10 62 IPR001005 -
Sto3g3033 291 PANTHER TRANSCRIPTION FACTOR MYB39-LIKE 1 221 - -
Sto3g3033 291 SMART sant 14 64 IPR001005 -
Sto3g3033 291 SMART sant 67 115 IPR001005 -
Sto3g3033 291 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
Sto3g3033 291 SUPERFAMILY Homeodomain-like 12 109 IPR009057 -
Sto3g3033 291 Gene3D - 12 68 - -
Sto3g3033 291 CDD SANT 70 113 IPR001005 -
Sto3g3033 291 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 10 62 IPR017930 -
Sto3g3033 291 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 221 - -
Sto3g3033 291 CDD SANT 17 62 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g3033 Sto-Chr3 35140240 35142046 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g3033 1 154 MYB Transcription Factor Family AT1G34670 83.766 4.23e-89 268
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Sto3g3033 Myb_DNA-binding 1.7e-16 CL0123