Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g3029 ATGGCCTACATAATAGTTCTCTTGCTAGTGGCTTGCTTTTGTGATTTTGTGTTTCCTGATTCACAAGGGGATGGAGATGCACTATATGCACTGAAGATATCACTGAATGCTACAGGCAATGAGCTTGCTGACTGGAATTCAGATCAAGTTAACCCTTGTACCTGGTCCCGTGTTTACTGTGACCAGAATTACAGAGTTGTTCAAGTTCAACTAGCATTTATGGGATTAACAGGATTCCTGACCCCAAGAATAGGAGCTTTAACAAGTCTTACAACTCTTTCTTTGCAAGGGAATGAAATCATTGGTGACATACCGAAAGAGTTAGGAAATCTGACAAACTTGACCAGGTTGGATTTGGAAAGCAACAGATTAACTGGTGAAATACCATCTTCGTTTGGTAAACTCAAAAAGCTTCAATTCTTGACTTTGAGTCAAAACAATCTCAGTGGGGCTATTCCCGAGTCAGTTGCTGGCCTCCCTGGCTTAATTAATGTTCTGCTGGATTCAAATAATCTCACTGGTCAAATTCCAGAGCAATTTTTCAAAGTTCCTAAGTACAATTTTACAGGAAACAATTTGAACTGTGGCCCAAATTATCAACACCCTTGTGCATCTGATAGCACATATCAAGGTTCACATCATAAAGCAAGGATTGGTCTTATAGTTGGAATCATTGTAGCGTTActtattattgtttttcttgGTGGTCTTCTATTCTTCTGGTGCAAATGTAGACACAAGGGCTACAAGCTTGAAGTTTTCGTAGATGTGCCAGGTGTATTGCTTGATGGGTTCTTTAGTGGCTCAAGATCCTTTGCCTCGTTAGCTGAAATGGCAGGGGAAGTTGATCGGCGGATAGAATTTGGTCAACTGAAAAGGTTTGCATGGAGAGAACTACAGATAGCTACAGATGACTTCAGTGAGAAAAATGTTTTAGGACAGGGAGGCTTTGGGAAGGTTTATAAAGGTATTCTTGCTGATAACACAAAGGTTGCTGTGAAAAGGTTAACTGATTTTGAGAGTCCTGGGGGAGATGCAGCTTTCCAGCGCGAAGTTGAGATGATAAGTGTTGCTGTCCACAGGAACCTATTACGGTTGATTGGATTTTGTACTACTCCAACTGAGCGTCTCCTAGTATATCCCTTCATGCAGAACTTGAGTGTTGCCTATCGTCTACGAGAACTTAAACCAGGGGAATCAGTTTTAGATTGGCCTGCAAGAAAGCGAGTGGCTCTAGGCACAGCCCGTGGCCTAGAATATCTTCATGAGCATTGCAATCCTAAGATTATTCATCGGGATGTGAAGGCAGCTAATGTGTTATTGGATGAAGATTTTGAGGCAGTTGTTGGTGACTTCGGTTTGGCAAAGCTAATTGATGTTCGAAGGACCAGTGTGACTACTCAAATTCGTGGGACGATGGGCCACATAGCTCCTGAATACTTGTCCACCGGGAAATCTTCAGAAAAGACTGATGTTTTTGGGTATGGGATTATGCTTTTGGAGCTTGTTACTGGCCAACGGGCAATTGACTTTTCTCGCTTGGAGGATGAAGATGATGTGCTATTGCTTGACCATGTTAAGAAACTGGAACGGGAAAAAAAACTAGACGATATTGTTGACCACAATCTGAGTAAAAATTACAACATACAAGAGGTTGAAATGATCATACAAGTTGCATTATTGTGCACACAAGCATCACCAGACGATCGGCCAGTAATGTCGGAGGTAGTAAGAATGCTAGAAGGAGAAGGGCTGGCTGAAAGGTGGGAGGAATGGCAGCATGTGGAGGTGACTCGGAGGCAAGAATACGAGAGGCTACGAAGAAGATTAGACTGGGGAGAAAATTCAGTTCATAACCAAGAAGCCATAGAGTTGTCTGGTGGGAGATGA 1890 0.4212 MAYIIVLLLVACFCDFVFPDSQGDGDALYALKISLNATGNELADWNSDQVNPCTWSRVYCDQNYRVVQVQLAFMGLTGFLTPRIGALTSLTTLSLQGNEIIGDIPKELGNLTNLTRLDLESNRLTGEIPSSFGKLKKLQFLTLSQNNLSGAIPESVAGLPGLINVLLDSNNLTGQIPEQFFKVPKYNFTGNNLNCGPNYQHPCASDSTYQGSHHKARIGLIVGIIVALLIIVFLGGLLFFWCKCRHKGYKLEVFVDVPGVLLDGFFSGSRSFASLAEMAGEVDRRIEFGQLKRFAWRELQIATDDFSEKNVLGQGGFGKVYKGILADNTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLRELKPGESVLDWPARKRVALGTARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLIDVRRTSVTTQIRGTMGHIAPEYLSTGKSSEKTDVFGYGIMLLELVTGQRAIDFSRLEDEDDVLLLDHVKKLEREKKLDDIVDHNLSKNYNIQEVEMIIQVALLCTQASPDDRPVMSEVVRMLEGEGLAERWEEWQHVEVTRRQEYERLRRRLDWGENSVHNQEAIELSGGR 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g3029 629 ProSiteProfiles Phosphatidylinositol-specific phospholipase X-box domain profile. 474 610 - -
Sto3g3029 629 SUPERFAMILY L domain-like 24 194 - -
Sto3g3029 629 Gene3D Transferase(Phosphotransferase) domain 1 383 600 - -
Sto3g3029 629 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 4 260 - -
Sto3g3029 629 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 267 629 - -
Sto3g3029 629 Gene3D Phosphorylase Kinase; domain 1 276 382 - -
Sto3g3029 629 ProSiteProfiles Protein kinase domain profile. 306 585 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto3g3029 629 SUPERFAMILY Protein kinase-like (PK-like) 286 581 IPR011009 -
Sto3g3029 629 Pfam Leucine rich repeat N-terminal domain 23 61 IPR013210 -
Sto3g3029 629 Gene3D Ribonuclease Inhibitor 21 205 IPR032675 -
Sto3g3029 629 ProSitePatterns Serine/Threonine protein kinases active-site signature. 429 441 IPR008271 GO:0004672|GO:0006468
Sto3g3029 629 Pfam Leucine rich repeat 112 172 IPR001611 GO:0005515
Sto3g3029 629 PANTHER LRR RECEPTOR-LIKE KINASE 267 629 - -
Sto3g3029 629 PANTHER LRR RECEPTOR-LIKE KINASE 4 260 - -
Sto3g3029 629 ProSitePatterns Protein kinases ATP-binding region signature. 312 334 IPR017441 GO:0005524
Sto3g3029 629 Pfam Protein kinase domain 307 577 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto3g3029 629 SMART serkin_6 306 580 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g3029 Sto-Chr3 35070375 35077415 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g3029 1 629 Receptor kinase-like Gene Family AT5G10290 72.019 0.0 898
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Sto3g3029 Pkinase 1.6e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g3029 - - gmx:100793416 992.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g3029 3 35070375 35077415 Sto3g3029 3 35070375 35077415 ECH