Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g3022 ATGGCTATTGCACCTTTTGGAAGTACGTCTGTTGCACAATGGGGAATTCGCCCTCATTTTTTCCTGAGATCCAGTGCATCAGGAAAGATTGCATCATATGGATACAATATCCCAGGCAGAGTGAGCTTTATGGCTTCCCCAAGTTCAAGTTTTTTTTCTCGGGATTCCTTGCATTCCTTTTTAGACATGGGTTCGTCTCAAACATTACAGCATCGAAGGGGATCAAGGTTGATTGTTAGAGCAGATGCAGATTACTACTCTGTCCTTGGGGTGTCGAAAAGCGCTAGCAAATCCGAAATTAAGAGTGCTTATCGGAAACTTGCCCGGAGTTATCATCCAGATGTGAACAAAGAAGCTGGAGCAGAGGAGAAATTTAAGGAAATTAGCAATGCTTACGAGGTCTTATCAGATGATGAGAAACGATCCATATATGACAGATATGGAGAGGCTGGGCTTAAAGGTTCTGGAATGGGCATGGGGGATTTCAGTAATCCTTTTGATCTTTTCGAGACCCTGTTTGAGGGCATGAATCGTGGCATGAACAATAGCTCTTGGAATGGAGCTATTGATGGTGAAGATGAGTATTACAGCCTTATCTTGAACTTTAAAGAAGCAGTTTTCGGAATAGAcaaagagatagagataagccGGCTAGAGACTTGTGGAACTTGCGATGGTACAGGGGCCAAACCAGGGACTACACCGACCAAATGCAGTACCTGTGGTGGTCAAGGCCGAGTCGTCTCATCAACAAGGACACCCTTAGGCATTTTCCAGCAGGCAACAACATGCTCCTCATGTAATGGAGCTGGAGAAATTTCAACACCTTGTAACACATGTTCCGGGGATGGTCGCGTGAGGAAAACAAAGCGGATAAGTCTGAAAGTCCCTCCCGGTGTGGACTCTGGTAGCCGTTTAAGAGTCCGAAATGAAGGGAATTCTGGAAGACGAGGTGGTTCTCCCGGTGATCTCTTTGTCGTCATTGAAGTTATTCCAGATCCTGTCCTTAAGCGCGACGACACCAACATTCTTTACTCTTGTAAGGTGTCTTATATTGATGCTATCTTGGGAACTACAATTAAGGTTCCTACCGTAGACGGCACGGTGGAACTAAAGATCCCAGCTGGGACACAACCCAATACAACGCTTGTGATGGCAAAGAAAGGTGTTCCCTTTCTGAATAAGAGCAATTTGAGGGGCGATCAATTGGTTCGTGTTCAAGTTGAAATACCAAAAAGATTGAACAGTGAAGAGAAGAAGATTATTGAGGAACTTGCTGATTTAAGCAAAGGCAAAACTGCAACCACTACCAGCAGGAGATGA 1323 0.4407 MAIAPFGSTSVAQWGIRPHFFLRSSASGKIASYGYNIPGRVSFMASPSSSFFSRDSLHSFLDMGSSQTLQHRRGSRLIVRADADYYSVLGVSKSASKSEIKSAYRKLARSYHPDVNKEAGAEEKFKEISNAYEVLSDDEKRSIYDRYGEAGLKGSGMGMGDFSNPFDLFETLFEGMNRGMNNSSWNGAIDGEDEYYSLILNFKEAVFGIDKEIEISRLETCGTCDGTGAKPGTTPTKCSTCGGQGRVVSSTRTPLGIFQQATTCSSCNGAGEISTPCNTCSGDGRVRKTKRISLKVPPGVDSGSRLRVRNEGNSGRRGGSPGDLFVVIEVIPDPVLKRDDTNILYSCKVSYIDAILGTTIKVPTVDGTVELKIPAGTQPNTTLVMAKKGVPFLNKSNLRGDQLVRVQVEIPKRLNSEEKKIIEELADLSKGKTATTTSRR 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g3022 440 ProSiteProfiles dnaJ domain profile. 84 148 IPR001623 -
Sto3g3022 440 SUPERFAMILY HSP40/DnaJ peptide-binding domain 193 332 IPR008971 GO:0006457|GO:0051082
Sto3g3022 440 SMART dnaj_3 83 140 IPR001623 -
Sto3g3022 440 Hamap Chaperone protein DnaJ [dnaJ]. 81 434 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Sto3g3022 440 CDD DnaJ 84 137 IPR001623 -
Sto3g3022 440 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 208 288 IPR036410 -
Sto3g3022 440 Gene3D - 191 326 - -
Sto3g3022 440 ProSitePatterns Nt-dnaJ domain signature. 125 144 IPR018253 -
Sto3g3022 440 CDD DnaJ_C 192 414 - -
Sto3g3022 440 Gene3D - 221 284 - -
Sto3g3022 440 SUPERFAMILY Chaperone J-domain 81 176 IPR036869 -
Sto3g3022 440 PRINTS DnaJ domain signature 86 104 IPR001623 -
Sto3g3022 440 PRINTS DnaJ domain signature 104 119 IPR001623 -
Sto3g3022 440 PRINTS DnaJ domain signature 120 140 IPR001623 -
Sto3g3022 440 PRINTS DnaJ domain signature 140 159 IPR001623 -
Sto3g3022 440 ProSiteProfiles Zinc finger CR-type profile. 208 289 IPR001305 GO:0031072|GO:0051082
Sto3g3022 440 PANTHER BNAA01G34580D PROTEIN 37 435 - -
Sto3g3022 440 Gene3D - 331 440 - -
Sto3g3022 440 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 37 435 - -
Sto3g3022 440 CDD DnaJ_zf 221 284 IPR001305 GO:0031072|GO:0051082
Sto3g3022 440 Pfam DnaJ domain 84 145 IPR001623 -
Sto3g3022 440 Gene3D DnaJ domain 81 185 IPR036869 -
Sto3g3022 440 Pfam DnaJ C terminal domain 196 411 IPR002939 -
Sto3g3022 440 SUPERFAMILY HSP40/DnaJ peptide-binding domain 336 422 IPR008971 GO:0006457|GO:0051082
Sto3g3022 440 TIGRFAM DnaJ_bact: chaperone protein DnaJ 84 427 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Sto3g3022 440 Pfam DnaJ central domain 221 284 IPR001305 GO:0031072|GO:0051082
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g3022 Sto-Chr3 35021800 35025884 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g3022 85 147 C2H2 Transcription Factor Family AT1G74250 47.826 2.74e-10 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g3022 K03686 - gmx:100811006 721.85