Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g3013 ATGGAGAGGTATGAGATAATAAGAGATATTGGGTCTGGTAATTTTGGTGTAGCGAAACTGGTAAGAGAGAAAAGGAGTGGTGAGTTCTTCGCGGTCAAGTTTATAGAGAGAGGTTTAaagATTGACGAGCATGTACAAAGGGAGATTATAAACCACAGATCCTTGAAGCATCCTAATATTATTAGATTCAAGGAGGTATTGCTTACTCCAACTCATTTGGCTATAGTCATGGAATATGCTGCTGGGGGAGAGCTCTTTGAAAGAATATGCAATGCTGGTAGATTCAGTGAGGACGAGGCTAGATACTTCTTTCAGCAATTGATCTCTGGAGTAAGCTACTGCCATTCCATGGAAATCTGCCACAGAGATCTTAAGCTGGAAAATACACTTTTAGATGGAAGCTCAGCACCAAGGCTCAAAATTTGTGACTTCGTGCTCTGCTTCATTCTGCAGTCATCAGTTCTGCACTCACAGCCCAAATCTACAGTAGGAACCCCTGCCTATATAGCCCCAGAGGTGTTATCAAGAAGAGAATATGATGGGAAGGTTGCAGATGTTTGGTCTTGTGGGGTGACCTTGTATGTGATGCTTGTTGGGGCTTATCCTTTTGAAGATCCAGAAGACCCAAGAAACTTCAGAAAAACACTTCAGAGAATCCTTAGTGTCCACTATTGTATTCCAGACTACGTTCGTATTTCCAAAGAGTGCAGGCACCTTCTGTCACGAATATTTGTGGCCAACCCCGAGAAGAGAATTACAATCCCAGAAATAAAAAAGCACCCATGGTTCTTGAGCAATTTGCCAATAGAATTTATGGAGGAAGGAGGGGAGGGTGGGTTTCAAAACGACGACGTAAATAGTGAAGAATCGTGTCAGAGCATTGAAGAAATATTGGCCATAATTCAAGAGGCTCGGAAAGCAGGGGAACATAGCCCTAAAATTGGAGGGATGTTTGTGGGAGGAAGCATGGACCTTGATGACATGGACGCGGATGCCGACATTGATGATGTTGAGACAAGCGGCGATTTTGTCTGTGCTTTGTGA 1044 0.432 MERYEIIRDIGSGNFGVAKLVREKRSGEFFAVKFIERGLKIDEHVQREIINHRSLKHPNIIRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARYFFQQLISGVSYCHSMEICHRDLKLENTLLDGSSAPRLKICDFVLCFILQSSVLHSQPKSTVGTPAYIAPEVLSRREYDGKVADVWSCGVTLYVMLVGAYPFEDPEDPRNFRKTLQRILSVHYCIPDYVRISKECRHLLSRIFVANPEKRITIPEIKKHPWFLSNLPIEFMEEGGEGGFQNDDVNSEESCQSIEEILAIIQEARKAGEHSPKIGGMFVGGSMDLDDMDADADIDDVETSGDFVCAL 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g3013 347 ProSitePatterns Serine/Threonine protein kinases active-site signature. 119 131 IPR008271 GO:0004672|GO:0006468
Sto3g3013 347 SUPERFAMILY Protein kinase-like (PK-like) 2 268 IPR011009 -
Sto3g3013 347 CDD STKc_SnRK2 3 262 - -
Sto3g3013 347 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Sto3g3013 347 Gene3D Transferase(Phosphotransferase) domain 1 80 269 - -
Sto3g3013 347 Pfam Protein kinase domain 4 263 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto3g3013 347 PANTHER SERINE/THREONINE-PROTEIN KINASE SAPK1 2 341 - -
Sto3g3013 347 Gene3D Phosphorylase Kinase; domain 1 1 79 - -
Sto3g3013 347 SMART serkin_6 4 263 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto3g3013 347 ProSiteProfiles Protein kinase domain profile. 4 263 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto3g3013 347 PANTHER SERINE/THREONINE KINASE 2 341 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g3013 Sto-Chr3 34928780 34933343 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g3013 3 273 CBL-interacting serine-threonine protein kinases AT4G24400 42.754 3.43e-69 220
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Sto3g3013 Pkinase 6.7e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g3013 K14498 - gmx:100807981 586.645
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g3013 3 34928780 34933343 Sto3g3013 3 34928780 34933343 ECH
Sto3g3013 3 34928780 34933343 Sto4g0576 4 3603861 3608214 ECH