Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g3000 ATGAAGCTTTCAGAATTTGTGAGATGCCCAATAAAGGTTCAAAGGTGTGCAGGAAGAGTTGTGCAGACAGAGCTAATAGTTCAAGTTGATCAGAGGGATATAGTTCCTGGTGACATTGTGATTTTTGAACCTGGTGACCTATTTCCAGGAGATATTAGATTGTTATCTTCAAAAAATCTGGTTGTAAGCCAGGCCTCACTTACTGGGGAATCTTGGCCAAATGAGAAAAATGCAGATATTAGAGAAGATCATAGCACTCCCTTGTTAGATTTAAAGAACATTTGCTTCATGGGCACAAACGTGGTATCAGGAAGTGGAACAGGGCTAGTGATATCGACTGGATCAAAGACATACATGAACACAATGTTCTCAAAGATTGGGAAGAAGAAGACAACAGATGAGTTTGAGAAGGGTTTGTGTTGGATTTTCTACATACTTGTGGCTGTAATGCTGGTAGTAGTGACCATCATAATTGTAATAAATTACTCAAACTCTCTTGATTTGAGCACAAGTCTCCTCTTTGGGATCTCTATTGCTTCTGCCCTCACTCCTCAAATGCTTCCCCTCATCATCAACACTTGCCTTGCTAAAGGTGCACTTGCTATGGCTCGAGACAGATGTATAGTCAAGAGCTTGACTGCTATACGTGACATGGGATCCATGGATATCCTCTGTATCGACAAGACAGGTACACTCACAATGAATCGGGCAATTGTGGTGAATCACCTTGACAGCAGAGGATTAGCACAAGAGAAAGTCCTACAATTTGCTTTCCTCAATTCTTACTTCAAGACTGATCAGAAGTATCCATTGGATGATGCAATTCTGGCTTATGTGTATTCGAATGGATTCAGGTTTCATCCATCCAAGTGGAAGAAGATTGATGAGATCCCTTTCGATTTCATACGCAGAAGAGTGTCTGTGATCATAGAAACAGAGCCTAGTGATCACAGAGGCTGCAGGTTCATGGTGACCAAAGGGGCTTTGGAGGAAGTAGTGAGGGTTTGTTCTTTTATTGACAACTTCAATGATCAAGATGATGATGGAGTTTCCTGCTTCTCTTCTTATGATTATCAGAGAATTTCAGCTTTGGCAGAAGAATTGAGCAATGAAGGGGTGAGAATTATAGGAGTAGCTATAAAGCAGCTAGGTGAAGGAAGCAAGAGCAATCACGAAGACAACATTGAAACCGACATGGTGTTCCTAGGTCTCCTAACCTTCTACGACCCTCCCAAGGACTCCGCCGAGCAAGCCCTATGGCGCTTAGCCGAGAAAGGCGTGAAGGCCAAGGTCCTCACCGGCGACTCCCTCTCCTTAACCATGCGAGTCTGCAAGGAGGTCGGCATCCGGACCACCCACGTGGTCACAGGCCCCGACCTCGACCAGCTCGACCCCGACACCTTCCACGAGACCGTAAGGCAAGCCACGGTCCTAGCCCGCCTCACCCCAACCCAAAAACTCCGAGTCGTCCAGTCCCTCCAGACCGTAGGGAGCCACGTGGTCGGCTTCCTCGGCGACGGCGTCAACGATTCTCTGGCTCTCGACGTCGCCAACGTCAGCATCTCCGTGGACTCGGGTGTCCCAATAGCAAAAGACATGGCAGATATCATTCTACTCGAGAAGGATCTGAACGTTCTAGTGGCTGGAGTAGAACACGGGAGGCTCACGTTTGGGAACACCATGAAGTACATTAAATTGTCCATTATTGCAAACTTGGGGAGTGTGGTTTCGCTTCTTCTGGCTTCGTTGACACTAAAGTTCCAACCTTTGACTTCGAGGCAGATTCTTACTCAGAATTTCTTGTGCAGTGTGGGGCAGATCGCTATCCCGTGGGATAAGATGGAGGAAGAGTATTTGAGGGGTCCCAAGAAGTGGTCTTCGAGAGGCTTGCCTGTGTTCATACTGTGGAATAGTCCTGTGTGCACACTGTGTGATGTTACGACGCTATTGTTTGTTTGGTTCTATTATTGCAGGGTCAATTATGGGGTGGTGGATCGGAGTTTTTTTCGTTCTGCTTGGTTTGTTGAGGGGTTGCTTATGCAGACTCTGATCATTCACTTGATAAGGACGGAGAAGATGCCTTTCATTCAGGATGTGGCTTCGTGGCCTGTGATTTGTTCCACCCTTGTGATTTCTGCCATGGGAATTGCGATTGTATTCTCACCCATTGGAGAAGCCTTGGGGTTTACGTCTCTACCACTGTCGTATTTTGGGTTCTTGGTTATTCTTTTCGTGGGATATTTTTTGGTTGGCCAGTTTGTTAAGAGACTTTACATACTGGTCTTCAAAAGTTGGCTTTGA 2301 0.4607 MKLSEFVRCPIKVQRCAGRVVQTELIVQVDQRDIVPGDIVIFEPGDLFPGDIRLLSSKNLVVSQASLTGESWPNEKNADIREDHSTPLLDLKNICFMGTNVVSGSGTGLVISTGSKTYMNTMFSKIGKKKTTDEFEKGLCWIFYILVAVMLVVVTIIIVINYSNSLDLSTSLLFGISIASALTPQMLPLIINTCLAKGALAMARDRCIVKSLTAIRDMGSMDILCIDKTGTLTMNRAIVVNHLDSRGLAQEKVLQFAFLNSYFKTDQKYPLDDAILAYVYSNGFRFHPSKWKKIDEIPFDFIRRRVSVIIETEPSDHRGCRFMVTKGALEEVVRVCSFIDNFNDQDDDGVSCFSSYDYQRISALAEELSNEGVRIIGVAIKQLGEGSKSNHEDNIETDMVFLGLLTFYDPPKDSAEQALWRLAEKGVKAKVLTGDSLSLTMRVCKEVGIRTTHVVTGPDLDQLDPDTFHETVRQATVLARLTPTQKLRVVQSLQTVGSHVVGFLGDGVNDSLALDVANVSISVDSGVPIAKDMADIILLEKDLNVLVAGVEHGRLTFGNTMKYIKLSIIANLGSVVSLLLASLTLKFQPLTSRQILTQNFLCSVGQIAIPWDKMEEEYLRGPKKWSSRGLPVFILWNSPVCTLCDVTTLLFVWFYYCRVNYGVVDRSFFRSAWFVEGLLMQTLIIHLIRTEKMPFIQDVASWPVICSTLVISAMGIAIVFSPIGEALGFTSLPLSYFGFLVILFVGYFLVGQFVKRLYILVFKSWL 766
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g3000 766 SFLD p-type atpase 207 554 IPR044492 -
Sto3g3000 766 Gene3D - 19 113 - -
Sto3g3000 766 SFLD Haloacid Dehalogenase 207 554 - -
Sto3g3000 766 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 469 583 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Sto3g3000 766 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 21 271 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Sto3g3000 766 SUPERFAMILY Calcium ATPase, transmembrane domain M 126 763 IPR023298 -
Sto3g3000 766 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 231 414 IPR023299 GO:0000166
Sto3g3000 766 Gene3D - 222 541 IPR023214 -
Sto3g3000 766 SUPERFAMILY HAD-like 395 552 IPR036412 -
Sto3g3000 766 PANTHER CATION TRANSPORTING ATPASE 1 765 - -
Sto3g3000 766 Pfam haloacid dehalogenase-like hydrolase 221 517 - -
Sto3g3000 766 SUPERFAMILY Calcium ATPase, transduction domain A 19 124 IPR008250 -
Sto3g3000 766 Pfam Cation transporting ATPase, C-terminus 588 757 IPR006068 -
Sto3g3000 766 Gene3D - 237 408 IPR023299 GO:0000166
Sto3g3000 766 ProSitePatterns E1-E2 ATPases phosphorylation site. 227 233 IPR018303 -
Sto3g3000 766 PRINTS Magnesium-transporting ATPase signature 138 154 IPR006415 GO:0015444|GO:0015693|GO:0016021
Sto3g3000 766 PRINTS Magnesium-transporting ATPase signature 155 174 IPR006415 GO:0015444|GO:0015693|GO:0016021
Sto3g3000 766 PRINTS Magnesium-transporting ATPase signature 259 272 IPR006415 GO:0015444|GO:0015693|GO:0016021
Sto3g3000 766 PRINTS Magnesium-transporting ATPase signature 562 577 IPR006415 GO:0015444|GO:0015693|GO:0016021
Sto3g3000 766 PRINTS Magnesium-transporting ATPase signature 580 591 IPR006415 GO:0015444|GO:0015693|GO:0016021
Sto3g3000 766 PRINTS Magnesium-transporting ATPase signature 612 625 IPR006415 GO:0015444|GO:0015693|GO:0016021
Sto3g3000 766 PRINTS Magnesium-transporting ATPase signature 632 648 IPR006415 GO:0015444|GO:0015693|GO:0016021
Sto3g3000 766 PRINTS Magnesium-transporting ATPase signature 669 690 IPR006415 GO:0015444|GO:0015693|GO:0016021
Sto3g3000 766 PRINTS Magnesium-transporting ATPase signature 719 740 IPR006415 GO:0015444|GO:0015693|GO:0016021
Sto3g3000 766 TIGRFAM ATPase-IIIB_Mg: magnesium-translocating P-type ATPase 5 765 IPR006415 GO:0015444|GO:0015693|GO:0016021
Sto3g3000 766 Gene3D - 114 720 - -
Sto3g3000 766 Pfam E1-E2 ATPase 19 204 - -
Sto3g3000 766 PANTHER MAGNESIUM-TRANSPORTING ATPASE, P-TYPE 1 1 765 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g3000 Sto-Chr3 34727428 34735793 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g3000 33 624 Primary Pumps ATPases(2) AT1G10130 27.047 1.14e-55 204
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g3000 K01531 - gmx:100795153 1167.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g3000 3 34727428 34735793 Sto3g3000 3 34727428 34735793 ECH