Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g2968 ATGAGAACTGCATATCTGAAATCAGTGCTCAGGCAAGAAGTGGGTTTCTTTGACAACCAAACTGACTCCTCCATCACCTTCCAAGTTATTTCCACCATTTCTTCTGATGCCCAAACCATCCATGACACCTTAGCTGAAAAGgcaccctcaTGTTTGGTTCACCTCTCATCATTCTTCTCAAGCTTCACAGTGGCCCTTATCCTATCATGGAGACTCGCAGTTTCTGCATTCCCATTCTCAATCATAATGATAATGCCAGCGATCATATCTGGGAAGAGCATGAAAGAATTGGGACTTGAGATGAAGAATGCTTATGGGGTTGCTGGGAGCATAGCAGAACAAGCAATCTCATCGATTCGGACAGTGTATTCCTACGTAGGAGAGAAACAAACACTAGAAAGATTTGGGTCATCCTTGGAAAAAAGCATGAAACTTGGGATAAGAATGGGATTAACCAAAGGTGTGGTGATCGGAAGCTTTGGGTTGATATACACAACTTGGGCTTTCCAAACTTGGGTTGGAAGCATTTTGGTCACCCGGAAAGGAGAGAATGGTGGGAATGTGTTTTGTGCTGAAATCTGTATCATTTGGGGAGGATTGTCTCTAATGAGTGCCCTACCAAATCTTGCTTTCATGGCAGAGGCAACATCAGCTGCTTCTAGAATCTCCGACATGATCAATCGAGTCCCTTCAATAAACTCCGAAAATGGAAAGGGGAAGATCATAAACGGCGTCGTTCGAGGAGAGATCACATTCAAAGATGTTAACTTTACCTACCCATCAAGACCAAAAACCCCAATTCTCAAAGGTCTTACCCTAAAACTAAGACCAGGCAAAACAATGGGTCTTGTGGGAGGGAGTGGTTCTGGAAAATCCACCATAATCTCTTTGCTTGAAAGGTTTTATGATCCCACAAGTGGGAAGATATTGCTTGATGGTTATGACATAAAGGGGCTTAAGCTCAAGTGGTTGAGGTCCCAAATGGGATTGGTGAATCAAGAGCCAATTTTATTTGCAACTTCTATTAAGGAGAATATTTTGCTTGGGAAGGAAGATGCTTCAATGGAAGATGTTGAAAGAGCAGCAAAAGCAGCAAATGCtcatgattttgttgttaaactTGCCAATGGCTATGAAACTCAAGTGGGACAACTTGGAACTCAATTATCCGGAGGCCAAAAGCAGAGGATTGCAATTGCAAGGGCTTTAATAAGAAACCCTAGAATCCTACTTCTCGACGAAGCCACAAGCGCTCTGGATTCGCAATCCGAAAAGCTAGTACAAGAAGCTCTGGATTCGGCTTCGCGAGGAAGAACAACGATTGTTATAGCCCATCGTCTTTCCACAATTCGTAACGCCGATTCAATCGTCGTTCTTCAATCTGGAAGAGTCGTGGAATCGGGTTCTCACGACGAGCTAATCCAATTGAACAATGGACAAGGCGGAATCTACAGCAAAATGCTGCGATTACAACAATCAGCCGTTCGAAACGAAGAAGAATCGACGACGCAATACGTTAACGCGAGTCCTCGAAATGTGGAAATTCTTAGATCTGCATACTCGAGCTGGCATAGTAGTCCCGCGCAGCCATTTAGCCCTATATATTCCATTAGTATTGCAGATTCTCCGCTTGTACCTTCTTGGGATGATGATGGCGGTTACTACGATTCGAGTTTCTCGCAATGGCGTTTGATACGAATGAATGCACCTGAATGGAAGCATGGTTTGTTAGGGTGTTTAGGAGCCATTGGATCTGGAATATGCCAACCAATTTACTCTTATTGTTTGGGAATTGTTGCGTCTGTTTATTTCATAAATGACGAATCTCGAATCAAATCTGAAATCAGGATGTACTCGATCATTTTTTGCACTATAGCTGTTGTGAACATGTTTTCAAATCTGCTTCAGCATTATAATTTTGCTGTCATGGGAGAACACTTGCTGAAAAGAGTGCGTGAAAATTTTCTGGCAAAAGTTTTGACGTTTGAGGTAGGATGGTTTGACCAAGAAGATAACACTAGTGCAGCAATTTGTGCAAAACTAGCCACTGAAGCTAACTTGGTTCGATCCCTTGTCGCAGAACGAATGTCATTGTTGGTTCAGGTTTTCTTCATGGCTTCCCTAGCTTTTGTGCTTGGTTTAGTTGCGTCATGGAGGGTGGCTATTGTGATGATTGCAATGCAGCCTTTGATTATTGGTTGTTTCTATTCAAAAAGCATTTTGATGAAGAGAATGTCAGGTAAAGCTCAAAAGGCACAAAGGGAGGGAAGTCAATTAGCAATGGAAGCTACCATCAACCACAGGACAATTACTGCATTTTCATCTGAGAAAAGGATACTAAATTTGTTCAAGATTGCTATGAAAGGCCCTCACAAAGAAAGCATTAGGCAATCCTGGATTTCAGGTTCCATCTTGTCAATatctcagtttttgacaacTGCATCTGTAACTCTGACTTTTTGGTATGGAGGGAGGTTGTTGAATCAAGGTTTAGTGGAATCAAAGAACCTTTTACAGGTTTTTCTTATCTTGATGGGCACTGGAAGACAAATTGCAGAGACTGGAAGTATGACTTCTGATATAGCCAAAAGTGGAAGAGCCATTGGTTCAGTTTTTGCAATCCTGGATAGGAAAAGTCAGATTGATCCTGAGGATGATGATGCTACACATGGAAAGTCCAGAAAAACTATAAAGGGTAACATAAAGCTAACGGATGTCTTTTTCTCTTACCCAGCAAGGCCTGATCAAATGATACTCAAGGGCCTCACTCTGGAGATTAAAGCTGGAAAGACAATGGCACTAGTGGGGCAGAGTGGCTCAGGGAAATCCACCATCATTGGTTTAATTGAAAGGTTCTATGACCCCGCGAAAGGATCAATATCCATAGATCATTGTGACATCAAAGAATTCAGTTTGAGAAAGTTAAGATCACAAATTGCATTAGTGAGTCAAGAGCCCACACTCTTTGCAGGAACTATACGTGACAACATTGTTTATGGGAAGAATGATGCTTCAGAGGATGAAATAAGAAGAGCAGCACATAAAGCAAATGCTCATGAGTTTATAAGTTCTATGAAAGATGGATATGATACATACTGTGGAGAAAGAGGAGTACAATTATCAGGGGGCCAAAAGCAGAGAATAGCAATAGCTCGAGCAATACTGAAGAACCCATCAATCTTGCTTTTAGATGAGGCAACTAGTGCCCTAGATAGTGTATCAGAGAGTCTAGTGCAGGAGGCATTGGAGAAGATGATGATTGGAAGAACATGTGTAGTTATAGCTCATCGTTTGTCCACAATACAAAGTGTAGATTCCATTGCTGTGATTAAAAATGGGAAGGTGGTGGAGCAAGGATCTCACTCGGAGTTATTAGCCATAGGACAAAATGGGGCATACCACTCAATGATTAGGCTACAAAATGGTCGCTCCAACTGA 3438 0.4145 MRTAYLKSVLRQEVGFFDNQTDSSITFQVISTISSDAQTIHDTLAEKAPSCLVHLSSFFSSFTVALILSWRLAVSAFPFSIIMIMPAIISGKSMKELGLEMKNAYGVAGSIAEQAISSIRTVYSYVGEKQTLERFGSSLEKSMKLGIRMGLTKGVVIGSFGLIYTTWAFQTWVGSILVTRKGENGGNVFCAEICIIWGGLSLMSALPNLAFMAEATSAASRISDMINRVPSINSENGKGKIINGVVRGEITFKDVNFTYPSRPKTPILKGLTLKLRPGKTMGLVGGSGSGKSTIISLLERFYDPTSGKILLDGYDIKGLKLKWLRSQMGLVNQEPILFATSIKENILLGKEDASMEDVERAAKAANAHDFVVKLANGYETQVGQLGTQLSGGQKQRIAIARALIRNPRILLLDEATSALDSQSEKLVQEALDSASRGRTTIVIAHRLSTIRNADSIVVLQSGRVVESGSHDELIQLNNGQGGIYSKMLRLQQSAVRNEEESTTQYVNASPRNVEILRSAYSSWHSSPAQPFSPIYSISIADSPLVPSWDDDGGYYDSSFSQWRLIRMNAPEWKHGLLGCLGAIGSGICQPIYSYCLGIVASVYFINDESRIKSEIRMYSIIFCTIAVVNMFSNLLQHYNFAVMGEHLLKRVRENFLAKVLTFEVGWFDQEDNTSAAICAKLATEANLVRSLVAERMSLLVQVFFMASLAFVLGLVASWRVAIVMIAMQPLIIGCFYSKSILMKRMSGKAQKAQREGSQLAMEATINHRTITAFSSEKRILNLFKIAMKGPHKESIRQSWISGSILSISQFLTTASVTLTFWYGGRLLNQGLVESKNLLQVFLILMGTGRQIAETGSMTSDIAKSGRAIGSVFAILDRKSQIDPEDDDATHGKSRKTIKGNIKLTDVFFSYPARPDQMILKGLTLEIKAGKTMALVGQSGSGKSTIIGLIERFYDPAKGSISIDHCDIKEFSLRKLRSQIALVSQEPTLFAGTIRDNIVYGKNDASEDEIRRAAHKANAHEFISSMKDGYDTYCGERGVQLSGGQKQRIAIARAILKNPSILLLDEATSALDSVSESLVQEALEKMMIGRTCVVIAHRLSTIQSVDSIAVIKNGKVVEQGSHSELLAIGQNGAYHSMIRLQNGRSN 1145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g2968 1145 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 895 1140 IPR027417 -
Sto3g2968 1145 SMART AAA_5 928 1114 IPR003593 -
Sto3g2968 1145 SMART AAA_5 277 463 IPR003593 -
Sto3g2968 1145 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 576 863 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Sto3g2968 1145 Gene3D ABC transporter type 1, transmembrane domain 1 872 IPR036640 GO:0005524|GO:0016021
Sto3g2968 1145 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 1 214 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Sto3g2968 1145 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 901 1137 IPR003439 GO:0005524
Sto3g2968 1145 Gene3D - 891 1145 IPR027417 -
Sto3g2968 1145 Pfam ABC transporter transmembrane region 577 844 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Sto3g2968 1145 Pfam ABC transporter transmembrane region 1 184 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Sto3g2968 1145 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 1 1142 IPR039421 -
Sto3g2968 1145 SUPERFAMILY ABC transporter transmembrane region 563 883 IPR036640 GO:0005524|GO:0016021
Sto3g2968 1145 CDD ABC_MTABC3_MDL1_MDL2 901 1140 - -
Sto3g2968 1145 CDD ABC_6TM_Pgp_ABCB1_D2_like 565 881 - -
Sto3g2968 1145 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 242 491 IPR027417 -
Sto3g2968 1145 CDD ABC_6TM_Pgp_ABCB1_D1_like 1 222 - -
Sto3g2968 1145 PANTHER OS04G0481700 PROTEIN 1 1142 - -
Sto3g2968 1145 Pfam ABC transporter 268 417 IPR003439 GO:0005524
Sto3g2968 1145 Pfam ABC transporter 919 1068 IPR003439 GO:0005524
Sto3g2968 1145 ProSitePatterns ABC transporters family signature. 389 403 IPR017871 GO:0005524
Sto3g2968 1145 SUPERFAMILY ABC transporter transmembrane region 1 230 IPR036640 GO:0005524|GO:0016021
Sto3g2968 1145 CDD ABC_MTABC3_MDL1_MDL2 250 491 - -
Sto3g2968 1145 ProSitePatterns ABC transporters family signature. 1040 1054 IPR017871 GO:0005524
Sto3g2968 1145 Gene3D - 248 504 IPR027417 -
Sto3g2968 1145 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 250 486 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g2968 Sto-Chr3 34376018 34383906 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g2968 577 1142 Calmodulin-binding Proteins AT2G36910 38.287 5.33e-114 383
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g2968 K05658 - gmx:100804664 1736.47