Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g2936 ATggctttattttctctctttcttctcatATTTCCCCTCCTAacatcaccaccaccagcacTTTGTCAAGTCCAAGAGTTCATCAGCATAGACTGTGGAGCCACAAGCAACTACACAGACAAAACCTCAGGACTGACATGGATTTCAGACTCCGGGATGATGAACCATGGCACACCAGTGGAAGTAGAGAACCCAAATGGGTTAGGTGTGCAGTACCAGAGACGCAGAGACTTTCCAACAGACACCAACAAGAAATACTGCTACACACTAATGACAGAAGAAAGAAGGCGATACTTGGTGAGAGCAACATTTCAGTACGGGAGCTTGAAAAGTGGGGACACATACCCTCAATTTCAGCTCTACTTGGATGCAACCAAGTGGGCCACTGTGTCAATATATGATGCCTCAAGGGTTTATGTGAAGGAAATGATCATCAGAGCACCCTCAAGCTCCATTGATGTGTGCATGTGCTGTGCTACCACTGGTTCGCCCTTCATATCGACTCTAGAGCTAAGGCCCTTGAATCTTTCTATGTATGCCACTGATTTTGAAGACAATTTCTTCTTGAAAGTGGCCGCAAGAATCAACTTTGGGGCTACAAGCGAGGATGCTATCAGGTATCCTGATGATCCATATGATAGAATTTGGGAATCAGATCTTATCAAAAGGCAAAATTATCTTGTTGGGGTGGCTCCAGGCACAGAAAGGATTAGTACAACAAAGAACATAGAGATAGGAACAAGAGAATACCCACCTGTCAAAGTTATGCAAACTGCAGTTGTAGGCACAAAAGGGGCACTCACCTACAGATTAAACCTGGAAGATTTCCCGGCCAATGCTCGAGCTTACGCGTATTTCGCCGAGATTGAAGATCTGCGTAATAACGAGACTCGAAAATTCAAATTGCAGCAACCTTATATGCCTGACTATAGCAATGCAGTGGTTAACATAGCTGAGAATGCCAATGGGAGCTACACTCTTTATGAACCTAGTTACATGAATGTGAGTCTGGAGTTTGTTCTGTCATTCTCCTTTGTTAAGACAAGGGATTCTACTCAAGGGCCGCTTTTAAATGCAATGGAAATAAGCAAATACCAACAGATTGCTTCAAAGACTGAAAGGCAAGATTTGAATGTTGTAAATGCATTTCACTCTATGTCTGCTGAAAGAGTCCAGATGAATGAAGGTGATCCTTGTGTTCCGACTCCGTGGGATTGGGTAAATTGTAGTGCCACCACCCTGCCAAGAATTACTAAAATAAACCTGTCAAGAAGAAATGTAACAGGCACAATTCCATCCCAGCTTAACAACATggaagagttgacagagttGTGGTTGGATGGGAACTTGATTACAGGGCCACTACCTGACATGAGCAATCTTATCAATCTAAAGATTGTGCATCTAGAGAACAACCAATTGGCTGGTTCACTACCATCTTACCTGGGTAGTTTGCCAAGTTTAGAAGCACTGTTCATACAAAATAACTCATTTACTGGAGAAATACCAGCAGGATTAATTTCcggaaaaatcattttcaaCTATGATGGTAATCCTGGACTACACAGAGGAAACAAGAAACACTACAAGTTGATACTCGGAATTTCAATTGGAGTTCTTGTGATTCTATCAATACTATTTTTAGGAAGTTTGGTGCTGATGCATAATCTTCGAAGAAAGGCATCTCAACAGAAAAGTGATGAAAATGGTGTTTCTGGACGCAGTAGAAGTAAGGCCGTAGGTGCATACTCATCAGTTCGGGGAGGAAATCTAATGGATGAAGGCATTGCTTGCTACATTGGGCTCTCAGAGTTGAAGGAAGCTACTAATAATTTTTCAAGGAAAATCGGCAAAGGAAGCTTTGGATGTGTCTATTATGGGAAAATGAAAGACGGGAAAGAGGTGGCAGTCAAGATTATGACTGATTCATCCAGCCATGGAAACCATCAATTTATGACTGAGGTAGCCCTTCTGTCAAGAATTCATCACAGAAACTTGGTTCCTTTGATTGGATATTGTGAAGAAGAATATCAGCATATTCTGGTTTACGAGTATATGCACAATGGCACCTTACGGGATCACATTTATGGTACAGGTTCTGCTAAACAGAAGGACTTGGACTGGTTAGCCCGTCTTCGCATTGCCGAAGATGCAGCTAAAGGTCTTGAATACTTACACACAGGATGCAATCCTAGTATCATACACCGAGACGTGAAGACCAGCAATATTCTCCTGGACATCAATATGAGAGCAAAAGTGTCAGATTTTGGACTCTCAAGACTAGCTGAAGAAGATTTAACCCACATATCAAGTATTGCAAGGGGAACTGTAGGCTACCTGGATCCCGAGTACTATGCAAATCAGCAATTGACAGAGAAGAGTGACGTCTACAGTTTTGGAGTTGTTCTGCTGGAACTCATATCCGGAAGGAAGCCTGTGTCATCAGAAGATTATGGTGCTGAAATGAATATTGTTCACTGGGCTAGATCCTTGATTCGCAGAGGAGACGTGATGAGCATGATGGATCCATCTCTAGCCGGAGACGTGAAGACAGAGTCGATCTGGAGAGTGGCCGAAATCGCTATACAATGCGTAGAACAGCATGGCGTGTGCAGGCCCAGGATGCAGGAGATCATTCTGGCGATACAAGAAGCTGTGAAGATCCAAAAAGGaacagataataataataacaataataagctcaaatcatcttcttcctccggTTCAAAAGCTCAATCCTCGCGAAAGACTTTACTTACGAGCTTTCTTGAAATTGAGAGCCCTGACTTGTCTAATGGTTGCCTCCCATCAGCTAGGTAA 2820 0.4096 MALFSLFLLIFPLLTSPPPALCQVQEFISIDCGATSNYTDKTSGLTWISDSGMMNHGTPVEVENPNGLGVQYQRRRDFPTDTNKKYCYTLMTEERRRYLVRATFQYGSLKSGDTYPQFQLYLDATKWATVSIYDASRVYVKEMIIRAPSSSIDVCMCCATTGSPFISTLELRPLNLSMYATDFEDNFFLKVAARINFGATSEDAIRYPDDPYDRIWESDLIKRQNYLVGVAPGTERISTTKNIEIGTREYPPVKVMQTAVVGTKGALTYRLNLEDFPANARAYAYFAEIEDLRNNETRKFKLQQPYMPDYSNAVVNIAENANGSYTLYEPSYMNVSLEFVLSFSFVKTRDSTQGPLLNAMEISKYQQIASKTERQDLNVVNAFHSMSAERVQMNEGDPCVPTPWDWVNCSATTLPRITKINLSRRNVTGTIPSQLNNMEELTELWLDGNLITGPLPDMSNLINLKIVHLENNQLAGSLPSYLGSLPSLEALFIQNNSFTGEIPAGLISGKIIFNYDGNPGLHRGNKKHYKLILGISIGVLVILSILFLGSLVLMHNLRRKASQQKSDENGVSGRSRSKAVGAYSSVRGGNLMDEGIACYIGLSELKEATNNFSRKIGKGSFGCVYYGKMKDGKEVAVKIMTDSSSHGNHQFMTEVALLSRIHHRNLVPLIGYCEEEYQHILVYEYMHNGTLRDHIYGTGSAKQKDLDWLARLRIAEDAAKGLEYLHTGCNPSIIHRDVKTSNILLDINMRAKVSDFGLSRLAEEDLTHISSIARGTVGYLDPEYYANQQLTEKSDVYSFGVVLLELISGRKPVSSEDYGAEMNIVHWARSLIRRGDVMSMMDPSLAGDVKTESIWRVAEIAIQCVEQHGVCRPRMQEIILAIQEAVKIQKGTDNNNNNNKLKSSSSSGSKAQSSRKTLLTSFLEIESPDLSNGCLPSAR 939
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g2936 939 SMART serkin_6 610 854 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto3g2936 939 SUPERFAMILY L domain-like 400 510 - -
Sto3g2936 939 Gene3D Ribonuclease Inhibitor 371 516 IPR032675 -
Sto3g2936 939 CDD STKc_IRAK 616 879 - -
Sto3g2936 939 ProSitePatterns Protein kinases ATP-binding region signature. 616 638 IPR017441 GO:0005524
Sto3g2936 939 PANTHER - 23 916 - -
Sto3g2936 939 Pfam Protein tyrosine and serine/threonine kinase 612 879 IPR001245 GO:0004672|GO:0006468
Sto3g2936 939 ProSiteProfiles Protein kinase domain profile. 610 886 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto3g2936 939 PANTHER OS07G0107800 PROTEIN-RELATED 23 916 - -
Sto3g2936 939 ProSitePatterns Serine/Threonine protein kinases active-site signature. 733 745 IPR008271 GO:0004672|GO:0006468
Sto3g2936 939 SUPERFAMILY Protein kinase-like (PK-like) 599 879 IPR011009 -
Sto3g2936 939 Gene3D Phosphorylase Kinase; domain 1 594 685 - -
Sto3g2936 939 Gene3D Transferase(Phosphotransferase) domain 1 686 911 - -
Sto3g2936 939 Pfam Malectin-like domain 30 364 IPR024788 -
Sto3g2936 939 MobiDBLite consensus disorder prediction 891 913 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g2936 Sto-Chr3 34038633 34047094 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g2936 1 939 Receptor kinase-like Gene Family AT1G67720 68.790 0.0 1290
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Sto3g2936 Malectin_like 1.1e-89 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g2936 - - gmx:100807148 1498.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g2936 3 34038633 34047094 Sto3g2936 3 34038633 34047094 ECH