Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g2919 ATGTATTTATTGGAGAAGCCACGACCCATCGATTTCTACAAAGAAGAAGGGAGCCGAGACATGATGATCGAGGTTGCTGCGTCCAATGGCGAACTCCCACCTCCTCAGCATCAAATGATCCTCGGCGAGAGCAGTGGGGAGGACCACGAGGTTGAAATCAAGGCGCCGAAGAAGCGCGCTGAGACTTGGGTTCAAGACGAGACGCGGAGTTTGATTGCGCTCCGCCGTGAGATGGATGGCCTTTTCAATACCTCCAAGTCCAACAAGCATTTGTGGGAACAGATATCGGCGAAGATGAGGGAGAAGGGATTTGATCGCTCGCCGACTATGTGTACGGACAAATGGAGAAATCTGTTGAAAGAGTTCAAGAAGGCTAAGCACCAAGATAGGGGAAGTGGGTCGTCTAAGATGTCGTATTATAAAGAGATTGAGGAGATTCTGAGGGAGAGGAATAAGAGTGTGCAGTACAAGAGCCCTACTCCTCCTAAGGTTGATTCTTATATGCAATTTGCCGACAAAGGTATTGAGGATACCAGCATTTCTTTTGGTCCAGTTGAAGCTACTGGCAGACCAACACTCAATCTTGAGAGACGTTTGGATCATGATGGACATCCCCTTGCCATCACCGCAGCAGATGCCGTTGCAGCAAGTGGAGTTCCTCCTTGGAATTGGAGAGAAACTCCTGGAAATGGTGGGGAAGGTCAGTCATGTTGTGGGCGAGTTATATCAGTCAAATGGGGTGATTATTCAAGAAGAATAGGTATTGATGGCACTTCGGAAGCCATTAAGGAGGCAATAAGGGCTGCTTTTAGGTTGAGAACTAGACGTGTATTTTGGTTGGAGGATGAAGACCAGATAATCAGAAGTCTTGATCGTGACATGCCTCTAGGAAATTACACTCTTCACCTAGATGAAGGAATGGCCATTAAAGTGTGTCTCTATGATGAGTCTGACCATATCCCTGTGCATACTGAAGAAAAGATATTTTACACTGAAGATGATTACCGTGATTTTCTCACACGTCGGGGCTGGACTTGTCTAAGGGAATTCGATGGCTACAGAAACATTGATAATATGGATGATCTTCGACCCGGTGCCATATACCGTGGTGTAAGCTGA 1119 0.4665 MYLLEKPRPIDFYKEEGSRDMMIEVAASNGELPPPQHQMILGESSGEDHEVEIKAPKKRAETWVQDETRSLIALRREMDGLFNTSKSNKHLWEQISAKMREKGFDRSPTMCTDKWRNLLKEFKKAKHQDRGSGSSKMSYYKEIEEILRERNKSVQYKSPTPPKVDSYMQFADKGIEDTSISFGPVEATGRPTLNLERRLDHDGHPLAITAADAVAASGVPPWNWRETPGNGGEGQSCCGRVISVKWGDYSRRIGIDGTSEAIKEAIRAAFRLRTRRVFWLEDEDQIIRSLDRDMPLGNYTLHLDEGMAIKVCLYDESDHIPVHTEEKIFYTEDDYRDFLTRRGWTCLREFDGYRNIDNMDDLRPGAIYRGVS 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g2919 372 SMART sant 59 121 IPR001005 -
Sto3g2919 372 Pfam Myb/SANT-like DNA-binding domain 62 146 IPR044822 -
Sto3g2919 372 Gene3D - 63 125 - -
Sto3g2919 372 CDD GT1 61 126 - -
Sto3g2919 372 PANTHER TRIHELIX TRANSCRIPTION FACTOR GT-4 5 371 - -
Sto3g2919 372 PANTHER - 5 371 - -
Sto3g2919 372 ProSiteProfiles Myb-like domain profile. 55 119 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g2919 Sto-Chr3 33882728 33892560 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g2919 20 371 Trihelix Transcription Factor Family AT3G25990 74.033 0.0 540
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Sto3g2919 Myb_DNA-bind_4 4.5e-21 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g2919 - - ccaj:109807736 695.656
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g2919 3 33882728 33892560 Sto3g2919 3 33882728 33892560 ECH