Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g2916 atggctagtTTGGACACTCCTTTAGGGATACTCAATGCTGCATTCTTCATTGCGATATTGGTATGGCTTTTGGTGGATAGTTTGCGAGAGAGCAGAAGAGACGACGACGACGTCGTATTGTCCTGCGCGCCCAAACGGTTTTCCGTTTTCGTCGTCGCGATCACGCTCGTATCCGATTTTGTTCTTGCGGTTTTCAATCTTGCGTTCGCGTTCCACGAGTACAAGACTCGGAAGATCGTATCCTATTACTGTGTGTCTGTGGCTTTAACCTGGGCTCTGGTGACGGTGGTTTCGGCGTACTCGATGAAGAGAGTGCTGAGGGAGAAGAGAACTTGGCCTCGCGTTCTGGTTCTCTGGTGGTTCTTCGCTGCTTTCTTGGATTCGCTCTTCGTTTCTTTGAAAATCGTCGGGAGTTTCGAATCCTTGGATTTGTTGTTTTTCGTGTCGCGGGATAATATAGTTGAGTTCGTTTCCTTTCCTCTTTTGGTACTCCTCTGTTTGAATGCTGTGTTGGCATTCGTAAATGCTGGAGTATGGAGTAAGCTCACATTTCAATGGCTGAACCCTGTTTTCAGGAAAGGTCAGATCCAGaaacttgaactctctcatatACCGTCAGTTCCTGAATCTGAAACAGCAGAAAATGCTTCCTCTGTGTTGGAAGAATCGCTTCGGAAACAAAAACTCGAAGATGGTTCCTTGACCAAAGCTATTGCTCGTTCTATCTGGAAATCCTTGACCTTAAATGCAGTTTTCGCAGGTGTGAACACTATTGCCTCTTATATGGGTCCTTTATTAATCACAAACTTTGTGAATTTCTTATCGGGAAATTATGATGATTCTTCGAGTGTCCACTATGGGCTAATTCTTGCCTTCGTTTTCTTCTTCGCGAAGACTGTGGAATCATTAACTCAAAGACAATGGTACTTTGGGGCCCAACGAATAGGAATCCAAGTGCGTGCAGCACTGACGGGGCTGATATATAGCAAGTCATTATCAATCAAGTGTGGTGGTGGACCAACAAATGGCAAGATCATAAATCTGATCAATGTAGATGTTGAAAGAATTGGGGATTTTTGTTGGTACATTCATGGAGTATGGTTGCTTCCAGTTCAAGTGGTTTTGGCCTTGTTCATCTTGTACAGGAATCTAGGCTTCACGCCTTCCATGGCTGCACTTGCTGTTACTATTTTGGTCATGGTGTCCAATACTCCCATGGCAAACAGGCAAGAAAGCCTCCACTCCAAGATCATGGAAGCTAAGGATTCAAGAATCAAAATGACTTCAGAGACTCTAAAGAACATAAGGATTTTGAAATTGCATTCGTGGGAATCCACTTTCTTGAGGAAACTCCTTCAGCTTAGGGAAATTGAAAGGAGCTGGCTTCAGAAATACCTATATACATGCTCAGCTGTGACTTTTCTCTTTTGGACATCACCAACTCTTGTTTCTGTGGTCACTTTTGGTGTGTGTATAATGGTGAAAACAGAATTAACAGCAGCCACAGTTCTCTCCGCTTTAGCAACTTTTCGTATCTTACAAGAACCAATCTACAACCTACCTGAGCTTATTTCCATGATAACTCAGACAAAAGTCTCCATTGATCGAATCCAGGAGTTTATCAAAGAAGAGGATCAAAAGCAGTACATGATCAAGCATACTTTGAAATCCTCTGATATAGCCATTGAAATCAAAACAGGTGAATATTCATGGGAAGCAGATGATCAAAACCACAAGAAACCAACTATTCAAATTACAAATAAGTTGATGATAGAGAAAGGTCAAAAGGTAGCAGTTTGTGGGTCTGTGGGCTCTGGCAAGTCAAGCCTTCTTTGCTGCATGCTTGGTGAGATTCCCAGGATTTCAGGGGCAGGAATCAAAGTCAATGGAAGTAGAAGTTATGTACCACAAAGCCCCTGGATTCAGTCTGGGACTGTGAGGGAAAATATATTGTTTGGCAGGCAAATGAATAAGGAGTTCTACGAGAATGTTCTGGAAAGCTGTGCTTTGCGCCAGGATATCAACATGTGGGTGGATGGAGATCTGACCATGGTGGGAGAGAGAGGCATAAACTTGAGTGGAGGCCAAAAGCAGAGAATTCAACTAGCAAGGGCTGTTTACAATGATTCAGATGTTTATTTCTTAGATGATCCTTTCAGTGCTGTTGATGCTCATACAGGAGCACATTTGTTTAAGAAATGTCTCATGCAACTTTTATCCGAGAAAACAGTAGTTTATGCTACTCATCAGCTGGAATTTCTAGAAGCTGCTGATCTTGTTTTGGTAATGAAAGATGGAAATATAGTTGGGTCAGGAAAATATAAAGATCTGATAGCATGTACCAGTTGTGAACTTGTTCAACAAATGGCTGCTCATAAAGAAACAATAAAACAAATGAACCCATGCCAAGAAGATAAAACCAAGAGCTGTAGACCCTGCTGTCAGATAAAGCAAATTGAAGTTGCTGAAGTTAATATTGACAAGACTCTTGAAGAGGACAACAAGCATTTGGAGAGAACcaaagaaggggaagctgagaCAGGCCGAGTTGATTGGGGTGTTTACTCAACATTTGTCACATATGCTTATAGAGGCGCATTTGTTCCCATTATTCTTCTGTGCCAAATTCTCTTTCAAGGAATGCAAATGGGAAGCAATTATTGGATTGCTTGGGCTACAGAACAAAGGGATAGGGTCAGTAAAGGGCAACTTATAGGGACATTTGTTCTATTATCTGGTGGCAGCTCCATATTCATACTGGGAAGGGCTGTTTTAATGGCAACAATTGCTGTAGAGACAGCTCAACGCCTTTACCATGAAATGATCACAACAGTTTTCAGGGCTCCCGTTTCATTTTTTGATACCACACCTTCAAGCAGAATCCTCAGTAGGTCTTCCACGGATCAAAGTACAGTAGACACAGATATACCTTACAGATTAGCTGGGCTTGTTTTTGCACTTATCCAGTTATTGAGTATCATCATCCTAATGTCACAAGTTGCTTGGCAAGtcattcttctctttcttatcGTGCTTGCTATCTCCATTTGGTATCAGGCTTATTACATCACTACTGCCAGAGAATTGGCCAGGATGGTAGGGATTCGTAAGGCTCCAATCTTGCATCACTTCTCAGAATCAATTGCTGGGGCAGCTACAATCCGTTGTTTCAATCAAGAGAAAAGATTTTTTAGCAAAGTTATGGCACTAATTGATGATTATTCTCGTGTAGCATTTCACAATTATGCCACCATGGAATGGTTGTCGGTCCGAATAAACTTTCTCTTTAACTTGGTCTTCTTTTGTGTTCTCATCATCTTGGTCACTCTACCAAGGTCTGCCATTGATCCCAGCTTGGCGGGTTTGGTAGCTACTTATGGTTTGAACTTGAGTGTTCTTCAAGCTTGGGTGATATGGAACCTTTGCAATGTGGAGAACAAAATGATATCAGTTGAGAGAATCCTACAATTCACAAATATACCAAGTGAAGCGCCATCGATAATTCAAGATTGCAGGCCAGAGATTGAGTGGCCAAGGGAGGGGAAAATTGAACTTCATAACCTTCATATACAGTATGATTCTGCAGCCCCTATGGTTCTCAAAGGTGTAACTTGCACTTTTCCAGGACAAAAGAAGATTGGGGTTGTGGGAAGGACAGGGAGTGGAAAATCCACTTTACTGCAAGCTCTATTTCGCGTGGTAGAGCCTTCAATAGGATGGATACGTATTGATGATGTAGATATTTGCAAGATTGGACTGAAGGATTTAAGATCTAGGCTTGGTATAATTCCTCAAGATCCTACCTTGTTTCAAGGCACTGTAAGGAACAACTTGGATCCTTTGGAACAATATTCAGACCAAGAACTTTGGGAGGTTCTCAGGAAGTGCCATCTCGCTGAAATCGTGAGAAAGGATCCAAGGCTTCTTGATGCTTCAGTGGCTGAGAATGGAGAAAATTGGAGTGTAGGACAAAGGCAGCTTGTTTGCATGGCCAGGCTGctattgaagaaaagaaaaattttggtTCTAGATGAGGCAACTGCATCCATTGACACAGCAACTGATAATTTAATTCAAAAGACTATCAGGGAAGAGACTAGTGGATGCACAGTCATTACAGTGGCACATAGGATTCCTACAGTTATTGATAATGACTTTGTATTGGTCCTTGATGAAGGGAAGATTGCAGAGTTTGATCACCCAGCAAAGTTGCTACAGAACagttcttcatcattctcaAAGCTGGTGTCAGAGTTTTTGAGAAGATCATCATCCCAAAGTAATTGCCAGAAGGATACAGTATGA 4305 0.4102 MASLDTPLGILNAAFFIAILVWLLVDSLRESRRDDDDVVLSCAPKRFSVFVVAITLVSDFVLAVFNLAFAFHEYKTRKIVSYYCVSVALTWALVTVVSAYSMKRVLREKRTWPRVLVLWWFFAAFLDSLFVSLKIVGSFESLDLLFFVSRDNIVEFVSFPLLVLLCLNAVLAFVNAGVWSKLTFQWLNPVFRKGQIQKLELSHIPSVPESETAENASSVLEESLRKQKLEDGSLTKAIARSIWKSLTLNAVFAGVNTIASYMGPLLITNFVNFLSGNYDDSSSVHYGLILAFVFFFAKTVESLTQRQWYFGAQRIGIQVRAALTGLIYSKSLSIKCGGGPTNGKIINLINVDVERIGDFCWYIHGVWLLPVQVVLALFILYRNLGFTPSMAALAVTILVMVSNTPMANRQESLHSKIMEAKDSRIKMTSETLKNIRILKLHSWESTFLRKLLQLREIERSWLQKYLYTCSAVTFLFWTSPTLVSVVTFGVCIMVKTELTAATVLSALATFRILQEPIYNLPELISMITQTKVSIDRIQEFIKEEDQKQYMIKHTLKSSDIAIEIKTGEYSWEADDQNHKKPTIQITNKLMIEKGQKVAVCGSVGSGKSSLLCCMLGEIPRISGAGIKVNGSRSYVPQSPWIQSGTVRENILFGRQMNKEFYENVLESCALRQDINMWVDGDLTMVGERGINLSGGQKQRIQLARAVYNDSDVYFLDDPFSAVDAHTGAHLFKKCLMQLLSEKTVVYATHQLEFLEAADLVLVMKDGNIVGSGKYKDLIACTSCELVQQMAAHKETIKQMNPCQEDKTKSCRPCCQIKQIEVAEVNIDKTLEEDNKHLERTKEGEAETGRVDWGVYSTFVTYAYRGAFVPIILLCQILFQGMQMGSNYWIAWATEQRDRVSKGQLIGTFVLLSGGSSIFILGRAVLMATIAVETAQRLYHEMITTVFRAPVSFFDTTPSSRILSRSSTDQSTVDTDIPYRLAGLVFALIQLLSIIILMSQVAWQVILLFLIVLAISIWYQAYYITTARELARMVGIRKAPILHHFSESIAGAATIRCFNQEKRFFSKVMALIDDYSRVAFHNYATMEWLSVRINFLFNLVFFCVLIILVTLPRSAIDPSLAGLVATYGLNLSVLQAWVIWNLCNVENKMISVERILQFTNIPSEAPSIIQDCRPEIEWPREGKIELHNLHIQYDSAAPMVLKGVTCTFPGQKKIGVVGRTGSGKSTLLQALFRVVEPSIGWIRIDDVDICKIGLKDLRSRLGIIPQDPTLFQGTVRNNLDPLEQYSDQELWEVLRKCHLAEIVRKDPRLLDASVAENGENWSVGQRQLVCMARLLLKKRKILVLDEATASIDTATDNLIQKTIREETSGCTVITVAHRIPTVIDNDFVLVLDEGKIAEFDHPAKLLQNSSSSFSKLVSEFLRRSSSQSNCQKDTV 1434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g2916 1434 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1183 1417 IPR003439 GO:0005524
Sto3g2916 1434 CDD ABCC_MRP_domain2 1181 1401 - -
Sto3g2916 1434 CDD ABC_6TM_ABCC_D1 248 537 IPR044746 GO:0140359
Sto3g2916 1434 Gene3D ABC transporter type 1, transmembrane domain 221 548 IPR036640 GO:0005524|GO:0016021
Sto3g2916 1434 Gene3D ABC transporter type 1, transmembrane domain 831 1164 IPR036640 GO:0005524|GO:0016021
Sto3g2916 1434 SUPERFAMILY ABC transporter transmembrane region 870 1165 IPR036640 GO:0005524|GO:0016021
Sto3g2916 1434 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 250 529 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Sto3g2916 1434 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1175 1409 IPR027417 -
Sto3g2916 1434 PANTHER OS01G0902100 PROTEIN 113 1425 - -
Sto3g2916 1434 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 587 780 IPR027417 -
Sto3g2916 1434 Gene3D - 580 816 IPR027417 -
Sto3g2916 1434 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 870 1146 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Sto3g2916 1434 Gene3D - 1167 1419 IPR027417 -
Sto3g2916 1434 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 113 1425 - -
Sto3g2916 1434 CDD ABCC_MRP_domain1 562 766 - -
Sto3g2916 1434 Pfam ABC transporter transmembrane region 881 1110 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Sto3g2916 1434 Pfam ABC transporter transmembrane region 247 516 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Sto3g2916 1434 CDD ABC_6TM_ABCC_D2 868 1158 IPR044726 GO:0140359
Sto3g2916 1434 SMART AAA_5 593 767 IPR003593 -
Sto3g2916 1434 SMART AAA_5 1209 1396 IPR003593 -
Sto3g2916 1434 Pfam ABC transporter 589 719 IPR003439 GO:0005524
Sto3g2916 1434 Pfam ABC transporter 1200 1348 IPR003439 GO:0005524
Sto3g2916 1434 ProSitePatterns ABC transporters family signature. 692 706 IPR017871 GO:0005524
Sto3g2916 1434 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 555 790 IPR003439 GO:0005524
Sto3g2916 1434 SUPERFAMILY ABC transporter transmembrane region 238 544 IPR036640 GO:0005524|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g2916 Sto-Chr3 33835390 33841133 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g2916 562 812 Calmodulin-binding Proteins AT2G36910 27.407 1.05e-19 94.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g2916 3 33835390 33841133 Sto3g2916 3 33835390 33841133 ECH