Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g2902 ATGGAGTCCGATTCAGACTCAGACGGATCTCATGTCTCTGCGACGCCTCCCAGAGAAGAGCGTCCATCATCATTGCTCAAATTCAAAGCGTCTTCCTCGTTCTCCACCAAATCTTCAAAATCCAAAAGACGCCCTTCAACGCCCGCCCAACCACCTTCCAAACCGCAATCCACTCAAGAACAATTACCATCTAATCCTTTATGCCTCCCCACTTTACCCTTCCAAATTCGTCGACCTTCTGACTGTGTTCCCCTACCGTCAACTTCCCAGTCCATTGAAATCCTCCCTGCTGGGTACTTCTCCAAATCCACGTCATTCTCGAGGATTAGAAGGCCTTTCGTCAATTTTGAAGATTCCTCTGGAATTGAACCTCCTCTTGATTCTGTCTCAAATCCCGGCATGAAGAACGAGGGCAAAGAGACAGAAGTGGAACGAAAAAGTCAAAGTGCTACGAACATTGCAAAAGTAGGAAATCGACATCCTAATCTGATTGGAGCTAATGCGCCAGCTCCGCCTGTTAAGCTACGAAAATGTGGTGGTGAGGGCAACTTCGTGAGGTTGAATATGAATGGGAAGAGACGGAAGTTTCTGAACAAGGGTAGCAAGAAGAAATTTACATATAAGGGACGTAGAGGTTACATGAGAAATAGAGGTAAATCGAAGCAAGGAGGAGAGGATCAAATGCATTCGGTCTTTGAGTCCGAGGAGGATGCATTTGTTTCGCAGATGGCACAAAAGAACTCCAGAGATTCTCGTGGATCAAAAGAATTTGATGGAAAAGTGATTGAAGAGGCTGTTTCAGCAGTTCGAGATGACCCATCCGATGATAATTTGGTGAATTTGCTAAAGTTAGTTTATGGTTATGATTCTTTTCGGGATGGGCAGTTGGAGGCAATCAAGATGGTACTTTCTGGGAAGCCAGCTATGCTTATTTTGCCTACTGGTGCTGGAAAGTCCCTTTGTTATCAGTTACCTGCATTGATTTTACCTGGGATTACCCTGGTTGTCAGTCCACTGGTAGCCTTGATGATTGATCAACAACGACAATTGCCTCCTATGATTAATGGTGGCCTTCTATGCAGCAGTCAGACGCCTGAAGAAGCCTCTGAAACGCTGAAGCGGATTCAAGAAGGTGCAACAAAGGTGCTTTTTGTTTCACCAGAGAGGTTCCTGAATGAAGAGTTTCTATCAATAATTTCTACTACTTCTACTGTATCTCTTGTTGTGGTTGACGAAGCACATTGTATATCTGAATGGTCACACAATTTTCGCCCTTCATTCATGAGACTTAGGGCATCTTTGCTCCACAACAAGCTCAATGCGAGCTCTATCCTTGCAATGACAGCAACTGCGACAACTTCAACTTTAGATGCCATCATGTCTGCTCTAGATATTCCCTTTACAAATCTTATTCAGAAGACGCAGTTAAGGGACAATATGCAGTTATCAGTATCTTTAACCAGAAATAGAATGAAAGACCTATTGATGTTGTTCAAGTCTCCTCCATTTGTGGAAGTTCAGAGCATCATCATATACTGCAAATTTCAGTCTGAAACTGACATAGTTAGCAGATATTTGAATGACAACAATATCTCAGCAAAGAGTTACCATAGTGGCATCGCTGCAAAGGAACGTAGCTATGTCCAGGAGTTGTTTAGTTCCAACAAGATCAGAGTGGTTGTTGCAACTGTGGCATTTGGAATGGGACTAGACAAAAGAGATGTTGGAGCTGTAATTCATTACAGTCTGCCAGAGAGTCTGGAGGCGTATGTACAGGAGATTGGACGTTCTGGGAGGGACGGGAGGTTGtccttttgccacctattttaTGATGATGAGACATATGTTAAACTCCGTAGTCTGATGTACAGTGATGGAGTAGATGAATATGCAGTGAACAAATTTCTGTCTGAAGTGTTTCCTGCTGATAGAATATCCAATGGGCAGATATGTTCCTTGATCAAAGAATCTGCTTCACGCAGGTTTGACATGAAAGAAGAGGTGATTCTCACACTTTTTACACGCTTGGAGTTGGGTGATGTGCAATACTTACAATTACTTCCACAGATAAATGCAACTTGCAATTTGAATTTTCACAAGACTGCGCCTATGTTGCTTGCCCAAAAGATTTCTGCTGTTGCCGCAATTCTAAAAAGGTCTGAAAATAAGCAAGGGCTATATGTCTTTGATGTGCCCTCTGTGGCAAACGACATGGGggttacagcttttgaattatcaaATCAGTTACATAATCTAAAGTTGAGTGGAGAAATAACCTATGAGATGAAGGACTTGGCTTATTGTTATAGGATTGTTAAAGCACCGACAGATTTCTGTTCACTGTCAGCAGATCTTACACGATGGTTACTTGAAGTTGAAAAATCGAAGGTACGGAAACTGGATGCAATGTTTAATGCTGCATATTTTGCAGTAAATATTTGTGATAAGACGCAGGGTTGCAGTGGTTCCAATCACACACCATGCTTGCAAAGGAAGATATTGGATTACTTTGCTGGAGTTGATAATAGTTACTTCTCCAAGAAGATGGATCAAAGCAGTCCTTTCTTGCGAGCAGATATAAAGGTCTTTCTACAGAGCAATTCACAGGCCAAATTCACACCAAGAGCCACTGCAAGGATAATGCATGGAATTGCAAGCCCAGCCTATCCTTCTACAACTTGGTCTACAACTCATTTCtgGGGAAGGTATAGGCATATAAACTTTCAGGTGGTGATGGAAGCAGCTAAGGAAGAACTCAAGAATTTTGTTGGGAAAGACATGCTGTAG 2787 0.4191 MESDSDSDGSHVSATPPREERPSSLLKFKASSSFSTKSSKSKRRPSTPAQPPSKPQSTQEQLPSNPLCLPTLPFQIRRPSDCVPLPSTSQSIEILPAGYFSKSTSFSRIRRPFVNFEDSSGIEPPLDSVSNPGMKNEGKETEVERKSQSATNIAKVGNRHPNLIGANAPAPPVKLRKCGGEGNFVRLNMNGKRRKFLNKGSKKKFTYKGRRGYMRNRGKSKQGGEDQMHSVFESEEDAFVSQMAQKNSRDSRGSKEFDGKVIEEAVSAVRDDPSDDNLVNLLKLVYGYDSFRDGQLEAIKMVLSGKPAMLILPTGAGKSLCYQLPALILPGITLVVSPLVALMIDQQRQLPPMINGGLLCSSQTPEEASETLKRIQEGATKVLFVSPERFLNEEFLSIISTTSTVSLVVVDEAHCISEWSHNFRPSFMRLRASLLHNKLNASSILAMTATATTSTLDAIMSALDIPFTNLIQKTQLRDNMQLSVSLTRNRMKDLLMLFKSPPFVEVQSIIIYCKFQSETDIVSRYLNDNNISAKSYHSGIAAKERSYVQELFSSNKIRVVVATVAFGMGLDKRDVGAVIHYSLPESLEAYVQEIGRSGRDGRLSFCHLFYDDETYVKLRSLMYSDGVDEYAVNKFLSEVFPADRISNGQICSLIKESASRRFDMKEEVILTLFTRLELGDVQYLQLLPQINATCNLNFHKTAPMLLAQKISAVAAILKRSENKQGLYVFDVPSVANDMGVTAFELSNQLHNLKLSGEITYEMKDLAYCYRIVKAPTDFCSLSADLTRWLLEVEKSKVRKLDAMFNAAYFAVNICDKTQGCSGSNHTPCLQRKILDYFAGVDNSYFSKKMDQSSPFLRADIKVFLQSNSQAKFTPRATARIMHGIASPAYPSTTWSTTHFWGRYRHINFQVVMEAAKEELKNFVGKDML 928
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g2902 928 MobiDBLite consensus disorder prediction 26 68 - -
Sto3g2902 928 Gene3D - 477 667 IPR027417 -
Sto3g2902 928 CDD SF2_C_RecQ 477 610 - -
Sto3g2902 928 Pfam Helicase conserved C-terminal domain 507 600 IPR001650 -
Sto3g2902 928 PANTHER ATP-DEPENDENT DNA HELICASE Q4 55 849 - -
Sto3g2902 928 SMART helicmild6 520 601 IPR001650 -
Sto3g2902 928 TIGRFAM recQ_fam: ATP-dependent DNA helicase, RecQ family 281 628 IPR004589 GO:0004386|GO:0006310
Sto3g2902 928 MobiDBLite consensus disorder prediction 124 148 - -
Sto3g2902 928 SMART ultradead3 287 476 IPR014001 -
Sto3g2902 928 Gene3D - 263 467 IPR027417 -
Sto3g2902 928 PANTHER DNA HELICASE RECQ FAMILY MEMBER 55 849 - -
Sto3g2902 928 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 331 619 IPR027417 -
Sto3g2902 928 MobiDBLite consensus disorder prediction 1 73 - -
Sto3g2902 928 ProSitePatterns DEAH-box subfamily ATP-dependent helicases signature. 406 415 IPR002464 -
Sto3g2902 928 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 490 647 IPR001650 -
Sto3g2902 928 Pfam DEAD/DEAH box helicase 293 456 IPR011545 GO:0003676|GO:0005524
Sto3g2902 928 CDD DEXHc_RecQ4-like 279 472 - -
Sto3g2902 928 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 299 469 IPR014001 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g2902 Sto-Chr3 33683556 33695365 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g2902 510 633 Eukaryotic Initiation Factors Gene Family AT3G19760 32.540 2.46e-14 74.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g2902 K10730 - gmx:100811214 1221.45