Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g2875 ATGCACAGCTTCGTCGGCGTCCCAAAGAAGCTTTTCtccgAGCCAAGAAAGTGGTGGATCGGTACCAGAAATCCTTGGGGAATATCGATCTATGGCATGCTCACTAAGAGAATGCTCGAGAATTTGAGAAAACTGAAAGAGATTAACAATAAACTCAGAAAACAGATCAGGAATAGGCTAGGTGCTGATTTGGAGGATTTGAGCTTCGATCAACTACGCAATCCTGAGGACGAAATAATCAATTCGTCTGCCTTGATACGTGAACGAAAGCTTATAGCAGATCTGAAAGGATTTTAA 297 0.4141 MHSFVGVPKKLFSEPRKWWIGTRNPWGISIYGMLTKRMLENLRKLKEINNKLRKQIRNRLGADLEDLSFDQLRNPEDEIINSSALIRERKLIADLKGF 98
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g2875 98 Pfam K-box region 36 90 IPR002487 GO:0003700|GO:0005634|GO:0006355
Sto3g2875 98 Coils Coil 35 55 - -
Sto3g2875 98 PANTHER FLORAL HOMEOTIC PROTEIN DEFICIENS ISOFORM X1 26 91 - -
Sto3g2875 98 PANTHER SERUM RESPONSE FACTOR HOMOLOG 26 91 - -
Sto3g2875 98 ProSiteProfiles K-box domain profile. 35 98 IPR002487 GO:0003700|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g2875 Sto-Chr3 33443754 33444417 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g2875 28 91 MADS-box Gene Family AT3G54340 43.750 4.47e-10 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g2875 K09264 - cit:102627791 71.2478