Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g2860 TTGAGATTGTTTCGGGGATATGCTACAACAGCAGCACTGAGGGAGGGGCATCTACAAGTATTGGAGATACTTATCTGTGCCGGAGCATCTCAGCTGGCATGCGAGGAGGCTTTGATAGAAGCAAGCCACTTGGGCCGGCCCAGATTTGCTGAGCTGCTCATGCAATCCAACATGATACGTCCTCAAGTTGCTGTTCATGGTCTTGTCTCTGCCTGTTGCCGGGGATTCGTTGAGGTTGTTGATGTACTCATCAAGCATGGAGTGGATGCCAATGCCGTTGACAGGACATTGCTTCAATCTTCAAAGCCATTTCTTCATGCTAATGTTGATTGCAATGCACTGTTTGCTGCTGTTGTCAGCAAGCAGATCAATGTTGTCAGATTGTTGTTGCAGGTTGGTGTAAGGACAGATATGAAGGTCAAACTAGGGGCTTGGACCTGGGAAACTGATACAGGAGTAGAATTTCGTGTAGGTGTGGGATTAGCTGATGCTTATCCTATCACCTGGTGTGCTGTGGAGTATTTTGAAGCTAGTGGAGCTATATTGCACATGTTGCTACGCCACCTCTCGCCTAGAAGTTTGCACTATGGAAGGACTCTTTTGCACCATGCCATCCTTTGTAACAATGAAAAAGCAGTGAATGTACTCCTAAATTGCAATGCAGATGCAGAAATGGCAGTGCAGACAATTGAGGAAACCAATTTTCGCCCCATTCACTTGGCCGCACGGCTTGGATCAAGCAACATTCTTTGTTGCCTAATCAATGCTAGTTGTAACTTGGACTCCCAAACAAAATCTGGAGATACGGCATTAATGATCTGTATTAGACATAAGCATGAGAATTGCCTGAGAGTCCTAGCATCAGCAGGTGCTGATTTGGGGCTGCTAAATTTATCTTGTCACTGTGCAACCTCAGTTGCAAAGTGTATTCAGTGGACTAATATCTTCCAGAGAGCAATTTTGGATGTGATTCGAGCTGGAAATGTTGTTAAATCCAGCAATACCTCCAGGTTTTCTGCTTTAATTTTTGCAACTCGTGCAAATGATATTGATGCTTTGAAGGAACTCCTTGAACATAGAATCACAGATCTAGACGAGCAGGATGAAAATGGATTCTCAGCTGTCATGGTAGCTGTAGCAGAAGGTAACACAGAGGCTTTCAGGTTGCTTCTAAAAGCTGGAGCTGATGTCCTAAAGCTGAGGAATAGGTATGGTTTGACGGCCCTTAACCTTATAGACATGAACCATAATGGGAAAGATTTTGAAAAAGTTTTGCTTGAACATGCGTTTGAAAAGGGAAGCAATGCCTCCAATATTGAACTAAACCCTTTACACAAATGTGCTTCCAACGGGGACACAGATCTTgttcataaattaataaaaggggGTTTTGATGTCAATGCTTTTGATGATGATGGATATACCCCATTAATGTTAGCAGCAAGAGAATGCCATAGTAAAGTATGTGAGCTTCTGGTCTCATTTGGTGCCAAATGTGATATCCAAAATGAGAGACATGAAACGGCCCTTTCACTTGCTAGAGAAAATGGCGTAGGGAATGAAGCAGAGCGTGTGATATTGGATGAGCTAGCTAGAAGACTAGTCTTGTGCGGGGCTCGCGTGAAGAAGCATACCAAGTGTGGGAAAGGGTCTCCTCATAGGAAGGTACTGAGGATGATAGAGTGTGCTGGAATATTACGATGGGGAAAATCGAATAAGAGAAATGTGGTTTGTAAAGAAGCTGAGGTTGGGCCCAGTGAAAAATTCAGATGGAATCGAAGGAGGAAGTTTGATGTTGATGAACCAGGAATTTTCCATGTGGTCACTACAACAAAGAAGGAGGTACATTTTGTAAGTGAAGGTGGAGTTGAAATGGCTGAGTTGTGGGTAAGGGGGATTAAGTTAGTGACGAGAGAAGCCATCTTTGGCCAATAG 1935 0.4336 LRLFRGYATTAALREGHLQVLEILICAGASQLACEEALIEASHLGRPRFAELLMQSNMIRPQVAVHGLVSACCRGFVEVVDVLIKHGVDANAVDRTLLQSSKPFLHANVDCNALFAAVVSKQINVVRLLLQVGVRTDMKVKLGAWTWETDTGVEFRVGVGLADAYPITWCAVEYFEASGAILHMLLRHLSPRSLHYGRTLLHHAILCNNEKAVNVLLNCNADAEMAVQTIEETNFRPIHLAARLGSSNILCCLINASCNLDSQTKSGDTALMICIRHKHENCLRVLASAGADLGLLNLSCHCATSVAKCIQWTNIFQRAILDVIRAGNVVKSSNTSRFSALIFATRANDIDALKELLEHRITDLDEQDENGFSAVMVAVAEGNTEAFRLLLKAGADVLKLRNRYGLTALNLIDMNHNGKDFEKVLLEHAFEKGSNASNIELNPLHKCASNGDTDLVHKLIKGGFDVNAFDDDGYTPLMLAARECHSKVCELLVSFGAKCDIQNERHETALSLARENGVGNEAERVILDELARRLVLCGARVKKHTKCGKGSPHRKVLRMIECAGILRWGKSNKRNVVCKEAEVGPSEKFRWNRRRKFDVDEPGIFHVVTTTKKEVHFVSEGGVEMAELWVRGIKLVTREAIFGQ 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g2860 644 SUPERFAMILY Ankyrin repeat 195 514 IPR036770 -
Sto3g2860 644 PANTHER ANKYRIN REPEAT-CONTAINING 2 643 - -
Sto3g2860 644 Gene3D - 428 582 IPR036770 -
Sto3g2860 644 ProSiteProfiles Ankyrin repeat profile. 370 402 IPR002110 GO:0005515
Sto3g2860 644 ProSiteProfiles Ankyrin repeat region circular profile. 439 471 - -
Sto3g2860 644 SUPERFAMILY Ankyrin repeat 11 142 IPR036770 -
Sto3g2860 644 PANTHER ANKYRIN DOMAIN PROTEIN 2 643 - -
Sto3g2860 644 ProSiteProfiles Ankyrin repeat profile. 439 471 IPR002110 GO:0005515
Sto3g2860 644 ProSiteProfiles Ankyrin repeat region circular profile. 370 397 - -
Sto3g2860 644 Pfam Ankyrin repeats (3 copies) 235 294 IPR002110 GO:0005515
Sto3g2860 644 Pfam Ankyrin repeats (3 copies) 337 397 IPR002110 GO:0005515
Sto3g2860 644 Pfam Ankyrin repeats (3 copies) 423 503 IPR002110 GO:0005515
Sto3g2860 644 SMART ANK_2a 370 399 IPR002110 GO:0005515
Sto3g2860 644 SMART ANK_2a 266 295 IPR002110 GO:0005515
Sto3g2860 644 SMART ANK_2a 63 92 IPR002110 GO:0005515
Sto3g2860 644 SMART ANK_2a 472 501 IPR002110 GO:0005515
Sto3g2860 644 SMART ANK_2a 233 262 IPR002110 GO:0005515
Sto3g2860 644 SMART ANK_2a 439 468 IPR002110 GO:0005515
Sto3g2860 644 SMART ANK_2a 109 138 IPR002110 GO:0005515
Sto3g2860 644 SMART ANK_2a 4 33 IPR002110 GO:0005515
Sto3g2860 644 SMART ANK_2a 196 225 IPR002110 GO:0005515
Sto3g2860 644 SMART ANK_2a 336 366 IPR002110 GO:0005515
Sto3g2860 644 ProSiteProfiles Ankyrin repeat profile. 196 228 IPR002110 GO:0005515
Sto3g2860 644 ProSiteProfiles Ankyrin repeat profile. 266 298 IPR002110 GO:0005515
Sto3g2860 644 Pfam Ankyrin repeat 196 223 IPR002110 GO:0005515
Sto3g2860 644 Gene3D - 319 427 IPR036770 -
Sto3g2860 644 ProSiteProfiles Ankyrin repeat profile. 472 504 IPR002110 GO:0005515
Sto3g2860 644 Gene3D - 6 151 IPR036770 -
Sto3g2860 644 Gene3D - 189 318 IPR036770 -
Sto3g2860 644 ProSiteProfiles Ankyrin repeat region circular profile. 472 504 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g2860 Sto-Chr3 33213341 33216599 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g2860 240 449 Ion Channels AT2G25600 29.412 5.11e-08 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g2860 - - gmx:100795638 1014.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g2860 3 33213341 33216599 Sto3g2860 3 33213341 33216599 ECH