Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g2843 ATGAGCTTGTTCTATGTAGTTGGATTTGGTCTAAAAGTGGGGCATCTGCTTTTGGTGCTATGTTGCTGGATTGTGTCTATCATTTACATGAATTGGTTTAACAACAGTGGAGTTATGGACACCAAGATCTTTGGGAATAGTTGCAAAATCCACCAACAATACTACCAGTATATTGGGTCCAAGAAAGTTAGGAGACATCTGTGGAGAAAGCTTTTGCTGATATGGGTTCTGGGTTGGACCATGGCTTCTTTGTGGATCCTCTGCTATATGACCTTTCAGGCCACTGAGAAGAGGAAAGAGACTCTGGCAAGTATGTGCGATGAGAGGGCTAGGATGCTTCAAGATCAGTTCAATGTTAGTATGAACCATATCCAAGCTATGTCAATTCTCATTGCAACCTTCCACCATGCCAAGAACCCCTCTGCCATCGACCAGAGAACATTTGCTAGGTACACAGAAAGAACTGCTTTTGAGAGGCCCCTTACAAGTGGTGTTGCGTATGCTGTGAGGGTGCTCCATTCTGAAAGGGAACAATTTGAGAAGCAACAAGGTTGGACCATTAAAAGGATGGATACGCTTGAGCCTTCCCCTGTTCGGGAAGAATATGCTCCTGTCATTTTTGCACAGGATACAATTTCCCATGAAGATCGAGAAAATGTGTTGCGCGCACGAGAATTAGGGAAAGGGGTTTTAACTGCTCCTTTCAGGCTTCTTAAAACAAATCGGCTAGGAGTTATCCTGACATTTGCCGTCTACAAGAGAGATCTCCCATCAAATGCAACTCCCAATGAAAGGATTCAAGCAACAGATGGGTATCTTGGAGGTGTCTTTGATATTGAGTCATTGGTGGAAAAATTGCTTCAACAGCTTGCTAGCAAGCAAACTGTAATTGTTAATGTGTATGATACTACTAATCATACCCATCCTATTGCCATGTATGGTTCAAATGTGTCAGATGATGGGTTCCATCATGTCAGCTCCCTGAACTTTGGAGATCCTTTCAGGAAGCATGAGATGCACTGCAGGTTCAAACAGAAACCTCCGTGGCCATGGTTGGCAATAACTACTTCAATTGGCATCCTTGTTATTGCACTCCTTGTAGGGCATATTTTCCATGCTACTGTAAATCGAATTGCTAAAGTAGAGGATGATTACCGTGAGATGATGGAACTCAAAAAACGAGCTGAGGCAGCTGATGTTGCAAAATCCCAGTTCCTGGCTACTGTGTCCCATGAAATTAGAACACCGATGAATGGTGTTCTAGGAATGTTGCATATGCTTATGGACACAGATCTAGATGTAACACAGCAGGAATATGTGAGAACAGCACAGGGTAGTGGTAAAGCTCTAGTGTCACTTATAAATGAGGTTTTGGACCAGGCAAAGATTGAATCTGGTAAGATAGAGCTTGAGGCAGTCCTCTTTGACTTACGAGCAGTTTTGGATGATGTATTGTCACTATTCTCTGAGAAATCTCAAGAAAAAGGAGTAGAGTTGGCAGTTTATATCTCAGATCAGGTTCCTGAACTGCTAGTAGGTGATCCGGGAAGGTTTCGGCAAATAATTACAAATCTCATGGGTAACTCAATTAAGGTAAATCTACACTGCCAAAAATTCACGGACAAAGGACACATCTTTGTCACTGTACATCTTATTGAGGAAGTTGTCAATTCAATTGAAGTTGCGACATCACAGAATACCTTGAGTGGCTTTCCCGTTGCTGATAGAAGCCAAAGTTGGAAAGGATTCAGTACTATCAGTCAAGAGGGACCTCTTGGTTCTTTCTCATCTTCCTCCTCTGAACGCATTACACTTATTGTTTCTGTTGAGGATACCGGTGAAGGTATTCCTCTAGAAGCCCAATCCCGCATATTCACTCCATTCATGCAGGTTGGCCCATCCATGTCCCGGAAACATGGGGGAACTGGTATTGGGCTTAGCATTAGCAAGTGTTTGGTTGGCCTCATGAATGGGGAAATTGGATTTGTGAGCACGCCCAAGATTGGATCTACTTTCACATTTACAGCTGTCTTCACCAATGGCTGCCCTACTTCAAATGAGTGTAAAAGTCAGCAAATCAACAACCAACCAAACCTTGCATCCTCAGAATTTCAGGGCATGACTGCATTAGTTATAGACCCTAGACCTGTCCGAGCTAAAGTGTCCAGATATCACATTCAACGGCTCGGTATTCATGTTGAAATTGCTTCAGATTTAAATCAAGGCTTGTCAATTGTGAGCAGTGGGAATCTAGTTATCAATATGGTCCTGGTTGAACAGGAGGTCTGGGATAGAGATTCAGGCATTTCTTCTCAGTTTATCAATAACACAAGGAGAATCGATCGCAGTGTTCCTCCTAAGTTATTCATTCTTGTTAATTCTGGTAGTTCTTCTCGAACAAGTTCTGTAACTGGTCTTCATAATCCAACAGTCATCACAAAACCTCTGAGAGCAAGTATGCTTGCTGCTTCTTTACAGCGAGCCATGGGTGTTGGGAACAAGGGAAATCCTCGAAACGGGGAGCTCCCAAGTTTGTCTCTCCGCCATCTTCTGCTTGGGAGAAAAATTCTCATTGTGGATGACAATAGTGTAAACCGCACAGTAGCAGCTGGCGCTTTAAGGAAATATGGAGCTGATGTGGTTTGTGTTAACAGTGGAAAAGAGGCCATCACATCGCTGACGCCACCCCATCAGTTTGATGCCTGTTTCATGGACATTCAAATGCCGGAAATGGATGGTTTTCAAGCTACTAGGAGGATTCGGGAGATGGAACGCCTTGTGAACACTGGAGAAATGCCTCTGGAAGGCTTAGAGAATCGTTCAAGTTGGCATGTACCCATTTTGGCCATGACGGCAGATGTAATCCAGGCAACACACGAGGAATGCTTGAGGTGTGGAATGGACGGATATGTTTCAAAACCTTTTGAAGCTGAACAGCTATATCGGGAAGTCTCAAGGTTTTTCCCATCATCTTGA 2976 0.4345 MSLFYVVGFGLKVGHLLLVLCCWIVSIIYMNWFNNSGVMDTKIFGNSCKIHQQYYQYIGSKKVRRHLWRKLLLIWVLGWTMASLWILCYMTFQATEKRKETLASMCDERARMLQDQFNVSMNHIQAMSILIATFHHAKNPSAIDQRTFARYTERTAFERPLTSGVAYAVRVLHSEREQFEKQQGWTIKRMDTLEPSPVREEYAPVIFAQDTISHEDRENVLRARELGKGVLTAPFRLLKTNRLGVILTFAVYKRDLPSNATPNERIQATDGYLGGVFDIESLVEKLLQQLASKQTVIVNVYDTTNHTHPIAMYGSNVSDDGFHHVSSLNFGDPFRKHEMHCRFKQKPPWPWLAITTSIGILVIALLVGHIFHATVNRIAKVEDDYREMMELKKRAEAADVAKSQFLATVSHEIRTPMNGVLGMLHMLMDTDLDVTQQEYVRTAQGSGKALVSLINEVLDQAKIESGKIELEAVLFDLRAVLDDVLSLFSEKSQEKGVELAVYISDQVPELLVGDPGRFRQIITNLMGNSIKVNLHCQKFTDKGHIFVTVHLIEEVVNSIEVATSQNTLSGFPVADRSQSWKGFSTISQEGPLGSFSSSSSERITLIVSVEDTGEGIPLEAQSRIFTPFMQVGPSMSRKHGGTGIGLSISKCLVGLMNGEIGFVSTPKIGSTFTFTAVFTNGCPTSNECKSQQINNQPNLASSEFQGMTALVIDPRPVRAKVSRYHIQRLGIHVEIASDLNQGLSIVSSGNLVINMVLVEQEVWDRDSGISSQFINNTRRIDRSVPPKLFILVNSGSSSRTSSVTGLHNPTVITKPLRASMLAASLQRAMGVGNKGNPRNGELPSLSLRHLLLGRKILIVDDNSVNRTVAAGALRKYGADVVCVNSGKEAITSLTPPHQFDACFMDIQMPEMDGFQATRRIREMERLVNTGEMPLEGLENRSSWHVPILAMTADVIQATHEECLRCGMDGYVSKPFEAEQLYREVSRFFPSS 991
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g2843 991 SUPERFAMILY CheY-like 703 830 IPR011006 -
Sto3g2843 991 Gene3D - 851 990 - -
Sto3g2843 991 Coils Coil 378 398 - -
Sto3g2843 991 Gene3D - 369 464 - -
Sto3g2843 991 ProSiteProfiles Response regulatory domain profile. 855 988 IPR001789 GO:0000160
Sto3g2843 991 SMART REC_2 854 984 IPR001789 GO:0000160
Sto3g2843 991 ProSiteProfiles CHASE domain profile. 139 340 IPR006189 -
Sto3g2843 991 Gene3D CHASE domain 143 347 IPR042240 -
Sto3g2843 991 PANTHER HISTIDINE KINASE 3 39 989 - -
Sto3g2843 991 ProSiteProfiles Response regulatory domain profile. 708 829 IPR001789 GO:0000160
Sto3g2843 991 PANTHER TWO-COMPONENT HISTIDINE KINASE 39 989 - -
Sto3g2843 991 SMART HisKA_10 401 466 IPR003661 GO:0000155|GO:0007165
Sto3g2843 991 Gene3D - 465 680 IPR036890 -
Sto3g2843 991 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 455 675 IPR036890 -
Sto3g2843 991 Gene3D - 90 142 - -
Sto3g2843 991 CDD REC_hyHK_CKI1_RcsC-like 856 984 - -
Sto3g2843 991 Pfam His Kinase A (phospho-acceptor) domain 401 466 IPR003661 GO:0000155|GO:0007165
Sto3g2843 991 Pfam Response regulator receiver domain 856 983 IPR001789 GO:0000160
Sto3g2843 991 CDD HATPase_EvgS-ArcB-TorS-like 518 678 - -
Sto3g2843 991 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 386 467 IPR036097 GO:0000155|GO:0007165
Sto3g2843 991 Pfam CHASE domain 142 313 IPR006189 -
Sto3g2843 991 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 513 678 IPR003594 -
Sto3g2843 991 PRINTS Bacterial sensor protein C-terminal signature 605 619 IPR004358 GO:0016310|GO:0016772
Sto3g2843 991 PRINTS Bacterial sensor protein C-terminal signature 623 633 IPR004358 GO:0016310|GO:0016772
Sto3g2843 991 PRINTS Bacterial sensor protein C-terminal signature 640 658 IPR004358 GO:0016310|GO:0016772
Sto3g2843 991 PRINTS Bacterial sensor protein C-terminal signature 664 677 IPR004358 GO:0016310|GO:0016772
Sto3g2843 991 SMART CHASE_2 139 315 IPR006189 -
Sto3g2843 991 Gene3D - 704 833 - -
Sto3g2843 991 ProSiteProfiles Histidine kinase domain profile. 408 680 IPR005467 -
Sto3g2843 991 CDD PRTases_typeI 808 883 IPR000836 -
Sto3g2843 991 SMART HKATPase_4 513 680 IPR003594 -
Sto3g2843 991 CDD HisKA 401 462 IPR003661 GO:0000155|GO:0007165
Sto3g2843 991 SUPERFAMILY CheY-like 853 987 IPR011006 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g2843 Sto-Chr3 33041403 33046731 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g2843 1 990 Miscellaneous Gene Families AT1G27320 66.065 0.0 1360
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Sto3g2843 CHASE 2.8e-29 CL0165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g2843 K14489 - gmx:100801546 1618.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g2843 3 33041403 33046731 Sto3g2843 3 33041403 33046731 ECH