Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g2830 ATGAAGATCGAGAGGGGTTTAGGTGGTTTCCCTGCTTGGTTACTTGCTCTGAATCCATCTCTAAATCTAAGATCATTTgatccttcttttcttcaactgGTGAGGAAACCATATACCATTTCTATGCAAAGGGAAAAGTGGACAGAGGAAGAGCATCAGAAGTTCCTTGAAGCCTTAAAATTGTATGGTCGTGGATGGCGTCAAATTTAA 210 0.3667 MKIERGLGGFPAWLLALNPSLNLRSFDPSFLQLVRKPYTISMQREKWTEEEHQKFLEALKLYGRGWRQI 69
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g2830 69 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 39 69 IPR017930 -
Sto3g2830 69 Gene3D - 46 69 - -
Sto3g2830 69 CDD SANT 46 69 IPR001005 -
Sto3g2830 69 ProSiteProfiles SANT domain profile. 45 69 IPR017884 -
Sto3g2830 69 SUPERFAMILY Homeodomain-like 31 69 IPR009057 -
Sto3g2830 69 PANTHER PROTEIN REVEILLE 7-RELATED 28 69 - -
Sto3g2830 69 ProSiteProfiles Myb-like domain profile. 39 69 IPR001005 -
Sto3g2830 69 Pfam Myb-like DNA-binding domain 44 69 IPR001005 -
Sto3g2830 69 PANTHER SWI/SNF COMPLEX-RELATED 28 69 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g2830 Sto-Chr3 32924114 32924833 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g2830 7 36 Glycoside Hydrolase AT1G72990 63.333 1.99e-07 44.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Sto3g2830 Myb_DNA-binding 6e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g2830 - - pvy:116106407 78.9517