Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g2795 TTGACAAGTAGTCGCCAGGATAAACCTTTCTCTTGGGTGTCGGAGAAGGTTTCATATGCTGATATAGTGAAGAATCTGGAAGGTGGTGTAGGGAGAAGGGATGATAACGGTTCTGAGGGCCGTAGTCGCAATGGTATAAGGGAGAGTTTGGCACcgcaaaacaaatttaaaaagacTCTTAAGATACACTTGGACCCTAATGGGAGAAGGAGAGTGGAGTGGGTCTTAGAAAGAAGGGTTCAACAACCGAGAATTCCTTTGAGGCTTGCATTAAGTAAAGAGGAGTTGGGTCAGGTTAAGGCCCAAAGCTCTCTTAAGAAAGTAGTGAATGGTAGCGATGGAGTTCGAAATGAGGCTATTAGACCTTTGGCATTGATGTGGGTGGCCAAAGGGGTAGACAAGGCAAAGAAAGGGACAGAGGTGATGGGTAGTGTATTGGGAGTTGTTTCTGGTGAAGGGAGTGATTATAATTCGAGTACTCATGCCTCATCAAAAGGAAAGGAGGTAATTCAAGACGTGGATTTAGGCCCAAGTTGTTCTAGTACTAAGGGCGAGATGACAAGCCATTCATTCTTTGACGAGGAGGCATTATCGTCAGATACTTCAGACACAGAAACTGTAGACAATGACTCTCTGATATCTCATTTTGAAAATGAAGAGGGGCTATTAATCGAGCAGTTAGAAAGAGAGTTTGTGGAAGagcaaaagcaacaaaataaggaGGCAGAAGTTCCTCTTGATGGCTTTGCTGTACTCTTTGGAGGGGAAGGTAAAGAGGCTACGTATGAGAATGTGTTGCCATCTTTGTTCAACAGTTTTTCCTTTGGGTCACTGGTAGTTCTCACCGCCGGAAGATCCAGTATCTCCGGCATCATTCTTGTCAAACCCAGCCTTCAGGCAACTCGTAACAGTGGCGCTTTGTTTAACGCTTGGTACCCCTAtactcaaaattataaattacgtATCGTTGATGCCGCATTATCTGATGTTGCTAGAATTGGGGAAGTTACTCTAATCGAGTCTAAAATCTATGGAGTTGGTTTCCAATCTAAAgatttGGATTCAGGAAAGTTGATTGACAATGCTAGGGTTAAAGATGGTATATACAGGATTGAAGTTCACAAGAAGGTCACTACCAACAACCAATCCTTTGTTGCTAGTGCGTTGGATGCCGCATCAACAAAAGATGAGGATGTCATGATGGAAAAAATGGTCGCTTCACTTATAGCTTCCGGTGCATCTGCTGGAGCAGTGACAGATCCAACTGCACAAGATCCAACTGGTAAAACTGCTGCATCTATAGCTGCCAACAGTGGGCATATGGGTCTGGCAGGTTATCTTTCAGAGGTATCTCTAACAAGCCATTTGTCATCCCTCACCCTTGAAGAAAGTGAGCTATCTAAAGGTTCTGCTGCGCTTGAAGCAGAGTTAACTGTAAGTAATGTCTCCAACGAAAATCTAAGTGCCAGTGAAGATCAGATTTCACTCAAAGATACCTTGGCTGCTGTGCGAAATGCAGCTCAGGCAGCTGCACGTATACAATCTGCTTTTCGTGCACATTCCTTTAGGaaacggagagagagagaaatttctGCAGCAGGTATAAATGGATATGGTATCAGTGATATTCCAGAGATTTCTGCCATGTCAAAACTTGCTTTTGGTAACTCACGTGATTACAATTCAGCTGCATTGTCTATTCAGAAGAAATATCGAGGTTGGAAAGGTCGTAAAGATTTCTTAGCATTACGACAGAAAGTAGTGAAGATACAGGCTCATGTCAGGGGTTACCAGGTTAGAAAACATTACAAGATAATATGTTGGGCAGTTGGATTCTTTGACAAGGCTGTGCTGCGATGGCGTAGGAAAGGAGCTGGTTTACGAGGTTTTCGACAAGAGACTCAGACAGTTGATGAAAGTGAAGATGAAGATATTCTCAAGGTTTTCCGAAAACAGAAAGTAGATGAAGCACTTGAGGAAGCTGTTTCACGGGTGATGTCTATGGTTGATTCTCCAGATGCTCGTCAACAATATCGTCGCATGCTTGAGAAATATCGGCAAGCTAAGGCTGAACTTGGCAGCACAAGTCAAGAAGTTGCATTATCAACTTTACTAGAGGATGCTTCCATAATGGAGGATGACGACTTGTATCAATTTACCTAG 2163 0.4175 LTSSRQDKPFSWVSEKVSYADIVKNLEGGVGRRDDNGSEGRSRNGIRESLAPQNKFKKTLKIHLDPNGRRRVEWVLERRVQQPRIPLRLALSKEELGQVKAQSSLKKVVNGSDGVRNEAIRPLALMWVAKGVDKAKKGTEVMGSVLGVVSGEGSDYNSSTHASSKGKEVIQDVDLGPSCSSTKGEMTSHSFFDEEALSSDTSDTETVDNDSLISHFENEEGLLIEQLEREFVEEQKQQNKEAEVPLDGFAVLFGGEGKEATYENVLPSLFNSFSFGSLVVLTAGRSSISGIILVKPSLQATRNSGALFNAWYPYTQNYKLRIVDAALSDVARIGEVTLIESKIYGVGFQSKDLDSGKLIDNARVKDGIYRIEVHKKVTTNNQSFVASALDAASTKDEDVMMEKMVASLIASGASAGAVTDPTAQDPTGKTAASIAANSGHMGLAGYLSEVSLTSHLSSLTLEESELSKGSAALEAELTVSNVSNENLSASEDQISLKDTLAAVRNAAQAAARIQSAFRAHSFRKRREREISAAGINGYGISDIPEISAMSKLAFGNSRDYNSAALSIQKKYRGWKGRKDFLALRQKVVKIQAHVRGYQVRKHYKIICWAVGFFDKAVLRWRRKGAGLRGFRQETQTVDESEDEDILKVFRKQKVDEALEEAVSRVMSMVDSPDARQQYRRMLEKYRQAKAELGSTSQEVALSTLLEDASIMEDDDLYQFT 720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g2795 720 SMART iq_5 505 527 IPR000048 GO:0005515
Sto3g2795 720 SMART iq_5 582 604 IPR000048 GO:0005515
Sto3g2795 720 SMART iq_5 559 581 IPR000048 GO:0005515
Sto3g2795 720 ProSiteProfiles IQ motif profile. 506 534 IPR000048 GO:0005515
Sto3g2795 720 MobiDBLite consensus disorder prediction 28 42 - -
Sto3g2795 720 ProSiteProfiles IQ motif profile. 560 589 IPR000048 GO:0005515
Sto3g2795 720 Gene3D - 560 607 - -
Sto3g2795 720 Pfam IQ calmodulin-binding motif 562 580 IPR000048 GO:0005515
Sto3g2795 720 Pfam IQ calmodulin-binding motif 585 604 IPR000048 GO:0005515
Sto3g2795 720 Coils Coil 224 244 - -
Sto3g2795 720 MobiDBLite consensus disorder prediction 28 50 - -
Sto3g2795 720 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 402 715 - -
Sto3g2795 720 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR 4 402 715 - -
Sto3g2795 720 ProSiteProfiles IQ motif profile. 583 607 IPR000048 GO:0005515
Sto3g2795 720 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 513 610 IPR027417 -
Sto3g2795 720 Coils Coil 678 698 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g2795 Sto-Chr3 32677177 32692835 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g2795 402 717 CAMTA Transcription Factor Family AT1G67310 68.125 1.45e-121 386
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g2795 K21596 - tcc:18608969 426.017
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g2795 3 32677177 32692835 Sto3g2795 3 32677177 32692835 ECH