Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g2794 ATGCAAACTGGTAGAGTATGGTTTTCTCAAATTGGGGGAAAATCTGTCCTTCTTTGGTTTGAAACCAGGGTTCTAGCTCTCAAAATGATTGAGCGGGGTTACAATATTAATGATCTGTACCGAGAAGCTCAAACGCGATGGCTGAAGCCTGCAGAAGTTATGTACATTTTACAGAATCATGAACAGTACCAGATCACCCAAGAGCCCCCTCAACAGCCCACAAgtGGATCCTTGTTTCTTTTTAACAAAAGAGTTCTGCGCTTTTTTCGTAAAGATGGTCATAATTGGCGGAAGAAAAGAGATGGAAGAACTGTGGGAGAAGCACATGAACGACTTAAGGTTGGAAATGTTGAAGCCTTAAATTGTTACTATGCACATGGAGAGCAGAACCCCACTTTTCAGAGACGGAGCTATTGGTTGTTGGATCCGGCATATGAGCATATTGTACTGGTACACTATAGAGAAACAAGTGAGGGAAGGCTCAATTCTGGACCTGTCACACAACTATCATCAGGACCCTCGTCTACATTTAGTCATAGCCCTAGCTCATATACTACCCAGAAGCTAGGGTCAACATCTGTGTTTGGTGATTCATATGAACCTAATCAGAGTTTCTCCAGTCCTGGATCAGTTGAAGTTACATCTGATGTCTTCATCAGTAACAATGGAATAGACCACTTAGATGGAACAGATGCAGAATCTGGAAATTCTACTGAACTCGAGGTTACACAAGCTTTGCGCCGGTTGGAGGAGCAGTTAAGTTTAAATGAGGACAGCTTCAAGGAGATTGATTCCTTGTGCAGAGAGCAGGAGAATACACATGATTCTCCAGCTGGTTGCCCTGCACTGAGCGATCATGGTCAATCGTATGATGGATATAGTGGCAAACAAGATGACAGTGGTGAATATTACCAAGAATTACTGGACCATAATTGCTCAAACGAAAATGATAATGCTGGATCTTGGAAGGAGATGTTGGAATCATGTAAGCCCTCATCCATGGTCAATTTACCAGAAAAACAAGTATACAAGCCTGCTGAGAATGGAAAACCACTATCATCTTCAGGAAGGTTTCCCATTGCCAACCGGGAAAACAGTCACTGGCTAAACTTTTGCAGTAACAATGCTGAAAACGATTTCTTCTCATTGGGTCAAGACATTAGTGGAGTCAAATTTCCTCCATATTCTTCTATAGTTGATACTCGAGAAACTAATTCAGACTATTATACAGCATTGTTTGACCAAAATCGAGCTGCAGCACCTCTAGATGTTGATTCAAGTTTGACTGTTGCACAAAAACAGAAATTCACAATTAGGGAAGTATCCCCGGCATGGGGTTATGCTAATGAAGCTACAAAGGTTATCATTGTTGGATCTTTTCTCTGTCATACATCAGGTTCTGCCTGGGCATGTATGTTTGGTGATGTTGAAGTTCCCATTGAAATAATTCAAGATGGTGTAATCCGTTGTGAAGCTCCATCTCTCCCTCCTGGAAAGGTTACTCTGTGCATTACTTCTGGTAATCGTGAGTCCTGCAGTGAGATTCGAGAGTTTGAATACCGCAATAAGACTAGCAGTTGCACTCACTGTAATTCATGGGAAACAGAAGCCAGTAAAAGTCCTGAAGAGCTGTTATTACTTGTTAGATTTGCACAGATGATCCtttcaaattctcatataaaTGAGATCACAGAATTTGGCAATCATGAACTAAGAAAACAGAAAATTGATGATGATTCATGGAGCCATGTTATAGAGGCTCTTCTAGTTGGTAGTGGAACTGCATCTGGTATTGTTGATTGGCTTCTTGAAGAGCTTCTAAGGGATAAGCTACAGTCATGGCTTTCTTTCAGATCCCACAAACGAGATGAACAGACAGGCTGTTCTTTGTCCAAAAAGGAGCAGGGCCTTGTACACATGGTTGCTGGATTGGGTTTTGAGTGGGCTTTGAACCCCATTCTCAGTTGTGGTGTGAATATAAATTTCCGAGACATCAATGGATGGACTGCCTTGCATTGGGCTGCACGATTTGGGAGGTAA 2040 0.4162 MQTGRVWFSQIGGKSVLLWFETRVLALKMIERGYNINDLYREAQTRWLKPAEVMYILQNHEQYQITQEPPQQPTSGSLFLFNKRVLRFFRKDGHNWRKKRDGRTVGEAHERLKVGNVEALNCYYAHGEQNPTFQRRSYWLLDPAYEHIVLVHYRETSEGRLNSGPVTQLSSGPSSTFSHSPSSYTTQKLGSTSVFGDSYEPNQSFSSPGSVEVTSDVFISNNGIDHLDGTDAESGNSTELEVTQALRRLEEQLSLNEDSFKEIDSLCREQENTHDSPAGCPALSDHGQSYDGYSGKQDDSGEYYQELLDHNCSNENDNAGSWKEMLESCKPSSMVNLPEKQVYKPAENGKPLSSSGRFPIANRENSHWLNFCSNNAENDFFSLGQDISGVKFPPYSSIVDTRETNSDYYTALFDQNRAAAPLDVDSSLTVAQKQKFTIREVSPAWGYANEATKVIIVGSFLCHTSGSAWACMFGDVEVPIEIIQDGVIRCEAPSLPPGKVTLCITSGNRESCSEIREFEYRNKTSSCTHCNSWETEASKSPEELLLLVRFAQMILSNSHINEITEFGNHELRKQKIDDDSWSHVIEALLVGSGTASGIVDWLLEELLRDKLQSWLSFRSHKRDEQTGCSLSKKEQGLVHMVAGLGFEWALNPILSCGVNINFRDINGWTALHWAARFGR 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g2794 679 Pfam IPT/TIG domain 437 520 IPR002909 -
Sto3g2794 679 Pfam CG-1 domain 42 155 IPR005559 GO:0003677
Sto3g2794 679 Gene3D Immunoglobulins 431 526 IPR013783 -
Sto3g2794 679 SUPERFAMILY E set domains 437 521 IPR014756 -
Sto3g2794 679 MobiDBLite consensus disorder prediction 270 300 - -
Sto3g2794 679 PANTHER CALMODULIN-BINDING PROTEIN 32 679 - -
Sto3g2794 679 Gene3D - 604 679 IPR036770 -
Sto3g2794 679 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 32 679 - -
Sto3g2794 679 SMART CG_1_2 39 157 IPR005559 GO:0003677
Sto3g2794 679 MobiDBLite consensus disorder prediction 160 184 - -
Sto3g2794 679 ProSiteProfiles CG-1 DNA-binding domain profile. 36 162 IPR005559 GO:0003677
Sto3g2794 679 SUPERFAMILY Ankyrin repeat 632 678 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g2794 Sto-Chr3 32661614 32675930 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g2794 34 678 CAMTA Transcription Factor Family AT1G67310 45.415 0.0 549
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g2794 K21596 - gmx:100786880 956.822