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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Sto3g2775
atggGAAGGGGACGAGTTGAGTTGAAGAGAATTGAGAACAAGATCAATAGGCAAGTGACCTTCGCGAAACGAAGGAACGGACTTTTGAAGAAAGCTTACGAGCTTTCCGTTCTCTGCGATGCCGAGGTTGCTCTCATCATCTTCTCCAATAGAGGAAAACTGTACGAGTTTTGCAGTAGTTCAAGCATGCTCAAAACGCTTGAAAGGTACCAGAAATGCAACTATGGAGCGCCTGAGCCTAATGTTTCTACAAGGGAAGCTTTGGAGTTAAGCAGTCAACAGGAGTACTTGAAGCTGAAGGCACGTTATGAAGCCCTACAACGATCCCAAAGGAATCTCATGGGAGAAGATCTTGGACCTTTAAGCAGCAAAGAGCTTGAGTCACTTGAAAGACAGCTTGATTCTTCCTTGAAGCAGATCAGATCAACACGGACACAATTTATGCTGGATCAACTCTCTGACCTTCAACGTAAGGAACACTTGCTAGGTGAGGCAAATAGGTCGCTTAGACAAAGGTTGGAGGGGTATCAAATAAATCCACTCCAATTGAATCCAAGTGCTGAAGAAATGGGATATGGGCGGCAGCCACATCAACCTCAGGAAGATGGCTTCTTTCATCCTTTGGATTGTGAGCCAACTTTGCAAATTGGATACCAGGCTGATCCAGTATTAGTGGTGACAGCAGGCCCAAGCGTGAATAATTACATGCCGGGATGGTTACCATGA
726
0.4518
MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERYQKCNYGAPEPNVSTREALELSSQQEYLKLKARYEALQRSQRNLMGEDLGPLSSKELESLERQLDSSLKQIRSTRTQFMLDQLSDLQRKEHLLGEANRSLRQRLEGYQINPLQLNPSAEEMGYGRQPHQPQEDGFFHPLDCEPTLQIGYQADPVLVVTAGPSVNNYMPGWLP
241
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Sto3g2775
241
ProSiteProfiles
MADS-box domain profile.
1
61
IPR002100
GO:0003677|GO:0046983
Sto3g2775
241
Pfam
K-box region
91
173
IPR002487
GO:0003700|GO:0005634|GO:0006355
Sto3g2775
241
SMART
madsneu2
1
60
IPR002100
GO:0003677|GO:0046983
Sto3g2775
241
ProSitePatterns
MADS-box domain signature.
3
57
IPR002100
GO:0003677|GO:0046983
Sto3g2775
241
Coils
Coil
126
146
-
-
Sto3g2775
241
SUPERFAMILY
SRF-like
2
76
IPR036879
GO:0003677|GO:0046983
Sto3g2775
241
CDD
MADS_MEF2_like
2
76
IPR033896
GO:0000977|GO:0045944
Sto3g2775
241
ProSiteProfiles
K-box domain profile.
89
179
IPR002487
GO:0003700|GO:0005634|GO:0006355
Sto3g2775
241
PANTHER
SERUM RESPONSE FACTOR HOMOLOG
1
225
-
-
Sto3g2775
241
PRINTS
MADS domain signature
3
23
IPR002100
GO:0003677|GO:0046983
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Sto3g2775
Sto-Chr3
32444003
32451275
Transposed
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Sto3g2775
1
241
MADS-box Gene Family
AT1G24260
76.016
3.59e-122
345
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Transcription factors information
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Regulatory Factors
Family
Gene
Hmm_acc
Hmm_name
E_value
Clan
TF
MADS-MIKC
Sto3g2775
K-box
4.6e-27
No_clan
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Sto3g2775
-
-
tcc:18608957
439.884
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Event-related genes
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Gene_1
Chr_1
Start_1
End_1
Gene_2
Chr_2
Start_2
End_2
Event_name
Sto3g2775
3
32444003
32451275
Sto3g2775
3
32444003
32451275
ECH
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