Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g2752 ATGCATGGGGAAGTGGGAAAGAATATATCAAGAACACAGAAGAAAGAGAGGGTTGTGAATGTTTTGAGTGAGGTGAGGAAACCTTATACCATTTCTATGCAAAGGGAAAAGTGGACAGAGGAAGAGCATCAGAAGTTCCTTGAAGCCTTAAAATTGTATGGTCGTGGATGGCGTCAAATTGAAGTTATGCAGTTTGGCAGGAAGCATCATGGTGGTATAGGAGTTCCAGTTTTTCTAAAATGGGATggtacaaataaataa 261 0.387 MHGEVGKNISRTQKKERVVNVLSEVRKPYTISMQREKWTEEEHQKFLEALKLYGRGWRQIEVMQFGRKHHGGIGVPVFLKWDGTNK 86
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g2752 86 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 34 64 IPR006447 GO:0003677
Sto3g2752 86 Gene3D - 37 70 - -
Sto3g2752 86 CDD SANT 37 67 IPR001005 -
Sto3g2752 86 PANTHER PROTEIN REVEILLE 7-RELATED 15 61 - -
Sto3g2752 86 SUPERFAMILY Homeodomain-like 22 61 IPR009057 -
Sto3g2752 86 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 30 60 IPR017930 -
Sto3g2752 86 PANTHER SWI/SNF COMPLEX-RELATED 15 61 - -
Sto3g2752 86 Pfam Myb-like DNA-binding domain 35 67 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g2752 Sto-Chr3 32237743 32239188 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Sto3g2752 Myb_DNA-binding 1.7e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g2752 - - thj:104812176 82.8037