Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g2537 ATGGCAGGAGAAGAATCAGCACCAGGGAATCCATCATCAACGCCGGAATCACCGACCTCTCCTTCCGTTGGCTTCAACACAGATCAGCTTCCTCACACCAGCCGTGCATCCGAAGATGATCTTGAGGCTTCCGTTGATCCTGACATTGTACGGGATGAACCTGAAGAACccgaagaagatgatgaagggGAGGATCTTTACAATGACAATTTCATGGATGACTATCAGAGGATGGATGAGCATGACCAGTATGAATCAATTGGACTAGATGACTCCTTGGAGGATGATAGGGATATGGATAAGAGGATGGAGGACCGAAGGGCAGCTGAAATGGAGCTCGAAACTCGTGATGGTCGTATCTCCATTCGCAACAAGCTTCCTCAGCTTCTTCACGACCAGGATACAGATGATGATAGCTATAGGCCATCAAAAAGGGCTCGAGCGGATTTCAAGCCTCCACGTAGTGATGATGATATTGATGGGCTACAAAGTTCACCTGCAAGATCACAGCGGGGGCACTCAAGGGAGGATGTTCCAATGACTGATCAAACAGAGGATGAGCGATATGATGATGAATATGGTGAGGAAAGTGAATACGAGATGTATAGGGTTCAAGGAACACTTAGAGAGTGGGTTACAAGAGATGAAGTGCGACGATTCATTGCTAAAAAATTCAAGGATTTTTTACTCACTTATGTTAACCCAAAGAATGAACATGGTGACTTTGAGTATGTGCGGCTGATAAATGAGATGGTGTCAGCTAATAAGTGTAGTTTGGAGATTGATTACAAACAATTTATCTATGTCCATCCCAACATTGCCATCTGGCTGGCTGATGCACCTCAGTCTGTTTTAGAAGTAATGGAAGATGTCGCCAAAAATGTTGTCTTTCATTTACATTCTAACTACAGAAATATTCATCAGAAAATTTATGTTCGCATTACCAATCTACCAGTTTATGATCAAATTCGGAATATAAGACAGATACATTTGAACACAATGATCCGGATTGGGGGAGTTGTAACCAGGCGATCTGGAGTCTTCCCCCAGTTACAACAGGTAAAATATGACTGTAACAAATGTGGAACAATTCTGGGACCATTTTTTCAGAATTCTTATTCAGAAGTGAAGGTCGGTTCTTGCCCTGAGTGCCAATCGAAAGGACCATTCACTGTCAATATTGAGCAGACCATTTATAGGAATTATCAGAAGCTTACTCTTCAAGAAAGCCCCGGGACAGTTCCTGCAGGACGACTTCCAAGATACAAAGAAGTGATACTATTGAATGATTTGATTGACTGCGCTCGTCCTGGGGAAGAGATTGAGGTCACAGGTATTTATACTAACAACTTCGACTTGTCTCTAAACACAAAGAACGGTTTTCCTGTGTTTGCCACTGTGGTCGAGGCAAATTATGTTACAAAGAAGCAGGATCTCTTTTCATCCTACAAGCTTACACAGGAAGACAAAGAAGAGATAGAAAAGTTGGCCAAAGACCCCAGAATAGGAGAAAGGATAGTCAAGTCTATTGCCCCATCAATTTATGGTCATGAGGACATAAAAACTGCAATAGCTTTAGCTATGTTTGGAGGTCTAGAGAAAAATGTTGAAGGAAAGCATAGGCTGCGAGGGGACATAAATGTTCTTCTTTTGGGTGATCCAGGAACGGCAAAGTCACAATTTTTGAAGTACGTGGAAAAGACCGGGCAAAGAGCTGTTTATACTACTGGGAAAGGGGCTTCTGCTGTGGGGCTCACTGCTGCAGTTCACAAGGATCCAGTCACAAGGGAGTGGACCCTTGAAGGAGGAGCGCTTGTTCTGGCTGACAAAGGAATTTGTCTCATTGACGAGTTTGACAAGATGAACGATCAGGATAGGGTAAGTATCCACGAAGCCATGGAACAGCAGAGTATAAGCATATCAAAAGCGGGGATTGTGACATCTCTTCAGGCACGGTGCTCGGTCATTGCAGCTGCCAATCCAATTGGAGGAAGATACGACTCCTCGAAAACATTTTCTCAAAATGTTGAATTGACAGATCCCATCATTTCTCGTTTTGACATCCTTTGCGTTGTTAAGGATATTGTTGATCCAGTCACTGATGAAATGCTCGCGAAGTTTGTAGTTGAGAGTCACTTCAAGTCACAGCCTAAGGGTGCTAACATAGATGAGACGTCCTTAAATGAAGCCCATGATGTTTCCATACTTCCTCAAGATCTCACGGACAAGGAGTCCCTATTGCTAAAGCTCTGCAGAAGAGCTTTAGGAATAGATGATCTCTACAGCAAGAAGGAAGTCGAACCCTCTGCAGCCTCCCCAATGTTGGACTTGATTAAGCATATTATGTTCGAGTGTAGGGGTCGAAGCGGTAGTAGTGATGGGGTTTGGCTTAGgggccgTAAcattgggggacttatccttaggcaggagcaaTACCTggtatttatattgAGAtgccacgtgtcccaagatggaatattctGGAGCTTGCGTATCTTTTGGGATGTCATCATTAGTCTCGGACAAATGCTAGCGCAAAGGATTGTTCAGCGGGATTTTCCGAGAATCGTTAGGTTCCAAGAGGGCCATAATGCCTTAAGAGGGCTTTCCAAAAGATGCATTGCAAAGTTTGTCTTAGGCTTGCCGTTCTATGTCTTGTCACCTTTGGCGAGGTTGGTGAGGTCAAAGCCCCCCAgcgatgacCTGGTGAATCGTCCTCTAGGGGATGAGCGAGACCTCggacttggagagtcttcgtttttttGCCGGGCCACTGGTATTGTTCTGAGAAAATTTTCAGCGAGCAGACGAACTACTTGTCCTGCGACCATTGTAGGTCCTAGTGGAATGGCTGGTTGTGGAGCTGGTGCAGTGAGGGATAGTCGGGCGAACTCCATTGGGAGGGTTTCAAACTGTATTGAAGGCATCGGAGGCCCAACCGTTTTTAGTGCTAGCGGATCTGCCAAAGCCGGCGCATCTTGTATTGTTGTCTGGGCATCCGTGCTTGTTCGAGGAAGGCCTCCTTGTGCTTGTTGTAACAACGCTATCTCAGATTTTAAGCGAGCTATCTCTACTTCTTGCGAGGTCCTTGCGAAGTTGTACTGTGCTCTCCACGATGGCTACCTAAGATGCCGTGACATTCTGTGGCTGGTTGGTGGTTGGAGCCCCAGGTTCTGTTATGATGGGGTCCACTGCTCCTTGCCTGTTTCGCGTGCTGCGCCTTGGAGCGCTTGCGTCAATCGTGGTGGCAGCGGCAAGatgtgcaaggcattgtggtttgagaAGTActacggtgggcgccaatgtgctgacctaggtgcctacgtaccgttgtgtagggatcaaagttcacgtagtccGAAGAgtatacgtccatag 3378 0.4224 MAGEESAPGNPSSTPESPTSPSVGFNTDQLPHTSRASEDDLEASVDPDIVRDEPEEPEEDDEGEDLYNDNFMDDYQRMDEHDQYESIGLDDSLEDDRDMDKRMEDRRAAEMELETRDGRISIRNKLPQLLHDQDTDDDSYRPSKRARADFKPPRSDDDIDGLQSSPARSQRGHSREDVPMTDQTEDERYDDEYGEESEYEMYRVQGTLREWVTRDEVRRFIAKKFKDFLLTYVNPKNEHGDFEYVRLINEMVSANKCSLEIDYKQFIYVHPNIAIWLADAPQSVLEVMEDVAKNVVFHLHSNYRNIHQKIYVRITNLPVYDQIRNIRQIHLNTMIRIGGVVTRRSGVFPQLQQVKYDCNKCGTILGPFFQNSYSEVKVGSCPECQSKGPFTVNIEQTIYRNYQKLTLQESPGTVPAGRLPRYKEVILLNDLIDCARPGEEIEVTGIYTNNFDLSLNTKNGFPVFATVVEANYVTKKQDLFSSYKLTQEDKEEIEKLAKDPRIGERIVKSIAPSIYGHEDIKTAIALAMFGGLEKNVEGKHRLRGDINVLLLGDPGTAKSQFLKYVEKTGQRAVYTTGKGASAVGLTAAVHKDPVTREWTLEGGALVLADKGICLIDEFDKMNDQDRVSIHEAMEQQSISISKAGIVTSLQARCSVIAAANPIGGRYDSSKTFSQNVELTDPIISRFDILCVVKDIVDPVTDEMLAKFVVESHFKSQPKGANIDETSLNEAHDVSILPQDLTDKESLLLKLCRRALGIDDLYSKKEVEPSAASPMLDLIKHIMFECRGRSGSSDGVWLRGRNIGGLILRQEQYLVFILRCHVSQDGIFWSLRIFWDVIISLGQMLAQRIVQRDFPRIVRFQEGHNALRGLSKRCIAKFVLGLPFYVLSPLARLVRSKPPSDDLVNRPLGDERDLGLGESSFFCRATGIVLRKFSASRRTTCPATIVGPSGMAGCGAGAVRDSRANSIGRVSNCIEGIGGPTVFSASGSAKAGASCIVVWASVLVRGRPPCACCNNAISDFKRAISTSCEVLAKLYCALHDGYLRCRDILWLVGGWSPRFCYDGVHCSLPVSRAAPWSACVNRGGSGKMCKALWFEKYYGGRQCADLGAYVPLCRDQSSRSPKSIRP 1125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g2537 1125 PANTHER DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER 140 866 IPR031327 GO:0003677|GO:0005524|GO:0032508
Sto3g2537 1125 MobiDBLite consensus disorder prediction 1 195 - -
Sto3g2537 1125 Pfam MCM P-loop domain 490 712 IPR001208 GO:0003677|GO:0005524|GO:0032508
Sto3g2537 1125 MobiDBLite consensus disorder prediction 51 69 - -
Sto3g2537 1125 PRINTS Mini-chromosome maintenance (MCM) protein family signature 543 558 IPR001208 GO:0003677|GO:0005524|GO:0032508
Sto3g2537 1125 PRINTS Mini-chromosome maintenance (MCM) protein family signature 603 617 IPR001208 GO:0003677|GO:0005524|GO:0032508
Sto3g2537 1125 PRINTS Mini-chromosome maintenance (MCM) protein family signature 631 644 IPR001208 GO:0003677|GO:0005524|GO:0032508
Sto3g2537 1125 PRINTS Mini-chromosome maintenance (MCM) protein family signature 655 667 IPR001208 GO:0003677|GO:0005524|GO:0032508
Sto3g2537 1125 PRINTS Mini-chromosome maintenance (MCM) protein family signature 682 690 IPR001208 GO:0003677|GO:0005524|GO:0032508
Sto3g2537 1125 MobiDBLite consensus disorder prediction 7 32 - -
Sto3g2537 1125 SMART mcm 319 783 IPR031327 GO:0003677|GO:0005524|GO:0032508
Sto3g2537 1125 MobiDBLite consensus disorder prediction 129 158 - -
Sto3g2537 1125 Gene3D - 323 448 IPR012340 -
Sto3g2537 1125 PRINTS Mini-chromosome maintenance (MCM) protein 2 signature 332 349 IPR008045 GO:0003677|GO:0005524|GO:0005634|GO:0006270|GO:0042555|GO:1905775
Sto3g2537 1125 PRINTS Mini-chromosome maintenance (MCM) protein 2 signature 355 367 IPR008045 GO:0003677|GO:0005524|GO:0005634|GO:0006270|GO:0042555|GO:1905775
Sto3g2537 1125 PRINTS Mini-chromosome maintenance (MCM) protein 2 signature 390 404 IPR008045 GO:0003677|GO:0005524|GO:0005634|GO:0006270|GO:0042555|GO:1905775
Sto3g2537 1125 PRINTS Mini-chromosome maintenance (MCM) protein 2 signature 451 462 IPR008045 GO:0003677|GO:0005524|GO:0005634|GO:0006270|GO:0042555|GO:1905775
Sto3g2537 1125 PRINTS Mini-chromosome maintenance (MCM) protein 2 signature 466 477 IPR008045 GO:0003677|GO:0005524|GO:0005634|GO:0006270|GO:0042555|GO:1905775
Sto3g2537 1125 MobiDBLite consensus disorder prediction 33 50 - -
Sto3g2537 1125 Gene3D - 215 319 - -
Sto3g2537 1125 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 512 718 IPR027417 -
Sto3g2537 1125 Gene3D - 482 810 IPR027417 -
Sto3g2537 1125 Pfam Mini-chromosome maintenance protein 2 40 187 IPR008045 GO:0003677|GO:0005524|GO:0005634|GO:0006270|GO:0042555|GO:1905775
Sto3g2537 1125 Pfam MCM N-terminal domain 223 316 IPR027925 -
Sto3g2537 1125 SUPERFAMILY Nucleic acid-binding proteins 224 471 IPR012340 -
Sto3g2537 1125 PANTHER DNA HELICASE 140 866 - -
Sto3g2537 1125 Gene3D - 350 400 - -
Sto3g2537 1125 Pfam MCM OB domain 322 449 IPR033762 -
Sto3g2537 1125 ProSiteProfiles MCM family domain profile. 502 708 IPR001208 GO:0003677|GO:0005524|GO:0032508
Sto3g2537 1125 MobiDBLite consensus disorder prediction 70 121 - -
Sto3g2537 1125 ProSitePatterns MCM family signature. 611 619 IPR018525 GO:0003677|GO:0005524|GO:0006260
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g2537 Sto-Chr3 29488570 29503597 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g2537 24 865 Core DNA Replication Machinery Family AT1G44900 70.554 0.0 1153
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g2537 K02540 - qsu:111999780 1298.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g2537 3 29488570 29503597 Sto3g2537 3 29488570 29503597 ECH