Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g2514 ATGGCTCTAGAGCAACAATTATCACTGGGTCCGAATCCGAACTCCGTTGACGGCCAAATAGACGGAGCCACAGACGGCGTCGATGCTCGGCCGGCGTCCACCGACGGCGGAGAGGACGGGAGCAAAGCGCCGAGACTGCCTCGATGGACAAGACAGGAGATTATGGTGCTGATAAATGGCAAGAGGGACGCAGAGAACCAGTTCCGAGGGGGCCGTAGTGCAGGGTTACCATTCGGGACGGGTCAGCTCGAACCGAAATGGGCTTCGGTCTCATCGTACTGTAAAATCCATGGAGTGAATAGAGGACCGGTTCAGTGCCGGAAAAGGTGGAGCAATTTGGCCGGAGACTACAAGAAGATCAAGGAATGGGAGTCTCAGATAAGAGACGAAACGGAGTCGTTTTGGGTGATGAGAAACGATTTAAGGAGACAGAGGAAACTGCCTGGCTTCTTCGACAAGGAGGTCTATGATATTCTCGATTCGGGATCACAGGCTCCGACGTTGGCTTTGGCTCTCGCACCGGCTTCCGCCGcagcgacgacgacgacgactcCAGTCGAAAAGGGGAAGGAAAGCAGGGGCGTGGCGGCGGAGGAAGCCGACGCTGATACAGAGCCACACTTGTACAATAGTCAGAGCGCCGCCGGAGACGATGGCTTGTTCTCTGATTTCGAACAAGAAGAGGTTGGTGTGAGTCCAGAGAAGGAATCAACGAGGAAGGATGCCTCGCCGCATTCTACGGTATTACCTTCACCTATTCCAATCTCAGAGAAGCAATATCAGCCACTTCTCCGTGGCGGTCAAGGTGGAGCGAATGTTCAAGGAGGGAGCAATGAGAAACAGCGAGGCTCAAATCCAGAAATGGGTTCTACGTCTCAAGGACAAGGACGAGTGGGGAAGAGGAAGAGATTAGCAACAGAAGGGGAGGatgagattttgcaaaatcaattaattcaagtattggaaagaaatgggaAGATGCTAAGTGCACAGCTCGAAGCTCAGAATATAAATAACCAGTTGGATAGGGAGCAGAGGAAAGACCACACTAGTAACATAGTTGCTGTTCTGGATAAGCTTGCAGATGCTCTAGGCAGAATTGCTGATAAATTGTAG 1116 0.4919 MALEQQLSLGPNPNSVDGQIDGATDGVDARPASTDGGEDGSKAPRLPRWTRQEIMVLINGKRDAENQFRGGRSAGLPFGTGQLEPKWASVSSYCKIHGVNRGPVQCRKRWSNLAGDYKKIKEWESQIRDETESFWVMRNDLRRQRKLPGFFDKEVYDILDSGSQAPTLALALAPASAAATTTTTPVEKGKESRGVAAEEADADTEPHLYNSQSAAGDDGLFSDFEQEEVGVSPEKESTRKDASPHSTVLPSPIPISEKQYQPLLRGGQGGANVQGGSNEKQRGSNPEMGSTSQGQGRVGKRKRLATEGEDEILQNQLIQVLERNGKMLSAQLEAQNINNQLDREQRKDHTSNIVAVLDKLADALGRIADKL 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g2514 371 Gene3D - 49 119 - -
Sto3g2514 371 MobiDBLite consensus disorder prediction 1 19 - -
Sto3g2514 371 MobiDBLite consensus disorder prediction 271 297 - -
Sto3g2514 371 MobiDBLite consensus disorder prediction 1 46 - -
Sto3g2514 371 Pfam Myb/SANT-like DNA-binding domain 48 137 IPR044822 -
Sto3g2514 371 Coils Coil 327 347 - -
Sto3g2514 371 ProSiteProfiles Myb-like domain profile. 48 114 IPR001005 -
Sto3g2514 371 MobiDBLite consensus disorder prediction 228 242 - -
Sto3g2514 371 MobiDBLite consensus disorder prediction 176 307 - -
Sto3g2514 371 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASR3 25 371 - -
Sto3g2514 371 MobiDBLite consensus disorder prediction 191 205 - -
Sto3g2514 371 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASR3 25 371 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g2514 Sto-Chr3 29130272 29132541 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g2514 36 220 Trihelix Transcription Factor Family AT3G25990 27.083 3.99e-08 52.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Sto3g2514 Myb_DNA-bind_4 3.1e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g2514 - - gmx:100797767 431.795