Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g2502 TTGTCATCCATCATCTCAAAGAAAGATGATGCTGGTTCTACTGGCAGCAGGTCCTTTAGAGCTCTTGCATTAATTGGAGCTGGTGTCTCAGGGTTTTTGAGTTTTGCAACAACGGCAGCAGCTGATGAGGCTGAGCATGGCCTGGAATGTCCAAACTATCCTTGGCCTCACAAGGGCATCCTCAGTTCATATGATCATACTGCGATTCGTCGTGGTCATCAAGTTTATACAGAAGTCTGTGCTTCCTGCCATTCCATGTCTTTGATATCATACCGTGATTTGGTTGGTGTTGCTTATACagaagaagaggtgaaggctatgGCAGCTGAGATTGAGGTGACTGATGGTCCTAATGATGAGGGTGAGATGTATACACGCCCTGGTAAACTCAGTGATCGCTTTCCTCAGCCATATGCAAATGAAGCAGCAGCTAGGTTTGCCAATGGAGGAGCTTACCCTCCAGATCTAAGTCTTATTACCAAAGCTCGGCACAATGGACAGAACTATGTATATGCTCTTCTTACTGGTTATCGTGATCCCCCTGCTGGTGTTTCGATTAGAGATGGATTGTACTATAATCCTTATTTTCCTGGTGGAGCAATCGCCATGCCTCAAATGCTTGTTGAAGGCGCTGTTGAATATGAAGATGGTACCCCTGCTACTGTATCTCAGATGGGAAAAGATGTCGTGACATTCCTATCTTGGGCTGCTGAACCTGAGATGGAAGAGAGAAAATTGATGGGTTTCAAATGGATTTTTGTACTATCGCTTGCACTACTTCAAGCTGCTTATTTCCGCCGATTGAGATGGTCTGTTCTCAAGTCTCGCAAGCTGGTTGTTGATGTTGTCAACTAG 855 0.4398 LSSIISKKDDAGSTGSRSFRALALIGAGVSGFLSFATTAAADEAEHGLECPNYPWPHKGILSSYDHTAIRRGHQVYTEVCASCHSMSLISYRDLVGVAYTEEEVKAMAAEIEVTDGPNDEGEMYTRPGKLSDRFPQPYANEAAARFANGGAYPPDLSLITKARHNGQNYVYALLTGYRDPPAGVSIRDGLYYNPYFPGGAIAMPQMLVEGAVEYEDGTPATVSQMGKDVVTFLSWAAEPEMEERKLMGFKWIFVLSLALLQAAYFRRLRWSVLKSRKLVVDVVN 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g2502 284 PANTHER CYTOCHROME C1 7 284 IPR002326 GO:0009055|GO:0020037
Sto3g2502 284 PANTHER CYTOCHROME C1-1, HEME PROTEIN, MITOCHONDRIAL 7 284 - -
Sto3g2502 284 Gene3D - 240 283 - -
Sto3g2502 284 SUPERFAMILY Cytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane anchor 239 283 IPR021157 -
Sto3g2502 284 Gene3D - 44 239 IPR036909 GO:0009055|GO:0020037
Sto3g2502 284 Pfam Cytochrome C1 family 55 271 IPR002326 GO:0009055|GO:0020037
Sto3g2502 284 SUPERFAMILY Cytochrome c 48 238 IPR036909 GO:0009055|GO:0020037
Sto3g2502 284 ProSiteProfiles Cytochrome c family profile. 67 174 IPR009056 GO:0009055|GO:0020037
Sto3g2502 284 PRINTS Cytochrome C1 signature 53 72 IPR002326 GO:0009055|GO:0020037
Sto3g2502 284 PRINTS Cytochrome C1 signature 189 200 IPR002326 GO:0009055|GO:0020037
Sto3g2502 284 PRINTS Cytochrome C1 signature 200 219 IPR002326 GO:0009055|GO:0020037
Sto3g2502 284 PRINTS Cytochrome C1 signature 118 138 IPR002326 GO:0009055|GO:0020037
Sto3g2502 284 PRINTS Cytochrome C1 signature 220 239 IPR002326 GO:0009055|GO:0020037
Sto3g2502 284 PRINTS Cytochrome C1 signature 239 254 IPR002326 GO:0009055|GO:0020037
Sto3g2502 284 PRINTS Cytochrome C1 signature 73 92 IPR002326 GO:0009055|GO:0020037
Sto3g2502 284 PRINTS Cytochrome C1 signature 151 175 IPR002326 GO:0009055|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g2502 Sto-Chr3 29046985 29049685 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g2502 1 284 Chloroplast and Mitochondria Gene Families AT3G27240 83.566 1.37e-164 457
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g2502 K00413 - gmx:100777056 530.406