Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g2496 CTGCTCTTGCTCTTCTTACTTAGCTTGCATCACACTACCGTTGAGTGCCAGGGAAGGCTGAGTAAGCAGAACTCTTCAGAATCAGAATCAGACTCAGAGGCTGCATCTATGCCTTCTCAGTACAAAGATGACCTTCGCAAGATCGTCATTAGCATTGTATTAGGAGCGGTGTCTGGACTAGTTGGGTCTCTTTTGTTTGCACTTATAGTTCGTTGCTTTGTTCAGTATTTGAATCGGACCCCAATTCTGAAGGGCCCTGTCATATTTTCCCCAAAAATTGCTCCCAAAACACTTCAATCAGCTTTGGCAAAAGAGAACCATTTGCTTGGTTCAAGCCTAAATGGCAAATGTTACAGAACAGTGCTTGACAATGGGCTCACAATTGCCGTGAAGAGACTAACACCCTTTGAAAGTGGGTCCCCAGTGAGTAGAAAGAAGAGGGCAAAGAGGGAGATACAGAAGGAGCTGGAAGTGCTTGCCAGCCTAAGGCATAGGAATTTGATGAGCTTGAGGGCTTATGTTCGTGAACCTGACAGATTTTCTTTGGTTTATGATTATGTAGCTAAGGGCAGCCTGGCTGATGCCATGAACAGAGTTAAGGAAAATGAATTGCAGCTTGGGTGGGAGGTTCGGCTAAGGATTGCTGTTGGTGTGGTTAAGGGACTTCAGTATCTTCATTTCACTTGTGTGCCTCAGATTCTGCACTACAACATGAAGCCCTCCAATGTGATGCTGGACTCAGAGTTTGAACCCAGGTTGGCTGATTATGGACTGCTTAAGCTTCTACCCAACTTGGATAGAGCCACTTCTCCCTACACTCCTCCTGAATGTTTCCACAATTGCAGCAGGTACACCGATAAAAGTGACATATTCAGTTTCGGGATGATACTGGGTGTGTTGTTAACTGGTAGGGATCCAGGGGATGCATTCTTTGGAGAAGCAGTGAGTGGAGGGAGTATGGGATGTTGGCTAAGACAGTTGCAGCAAGCTGGAGATGCAAAGGAAGCACTTGATAAGAGTCTAATGGCAATTGGGGAAGAAGGCGACGAAGACGATATGCTTATGGCTGTCAGAGTTGCTGCTGCTTGCCTCTCTGACATGCCTGCGGACAGGCCTTCCAGTGATGAGCTTGTTCATATGCTAACCCAACTTCATAGCTTTTGA 1164 0.4622 LLLLFLLSLHHTTVECQGRLSKQNSSESESDSEAASMPSQYKDDLRKIVISIVLGAVSGLVGSLLFALIVRCFVQYLNRTPILKGPVIFSPKIAPKTLQSALAKENHLLGSSLNGKCYRTVLDNGLTIAVKRLTPFESGSPVSRKKRAKREIQKELEVLASLRHRNLMSLRAYVREPDRFSLVYDYVAKGSLADAMNRVKENELQLGWEVRLRIAVGVVKGLQYLHFTCVPQILHYNMKPSNVMLDSEFEPRLADYGLLKLLPNLDRATSPYTPPECFHNCSRYTDKSDIFSFGMILGVLLTGRDPGDAFFGEAVSGGSMGCWLRQLQQAGDAKEALDKSLMAIGEEGDEDDMLMAVRVAAACLSDMPADRPSSDELVHMLTQLHSF 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g2496 387 Pfam Protein kinase domain 105 379 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto3g2496 387 ProSiteProfiles Protein kinase domain profile. 103 387 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto3g2496 387 SUPERFAMILY Protein kinase-like (PK-like) 106 381 IPR011009 -
Sto3g2496 387 Gene3D Phosphorylase Kinase; domain 1 90 186 - -
Sto3g2496 387 Gene3D Transferase(Phosphotransferase) domain 1 187 386 - -
Sto3g2496 387 PANTHER INACTIVE LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE CORYNE 2 387 - -
Sto3g2496 387 Coils Coil 145 165 - -
Sto3g2496 387 PANTHER - 2 387 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g2496 Sto-Chr3 28976798 28979225 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g2496 49 384 Receptor kinase-like Gene Family AT2G31880 32.773 1.23e-60 205
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-2 Sto3g2496 Pkinase 1.1e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g2496 - - gmx:102664172 607.446