Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g2435 ATGACCGTTAGAAACCCTTCCATCTCTCACTATTTGCCTGAATCGAAAACCTTTCCTTCTACATGGGTGACGACGCTGAAGCCGGTGAACGACGACGAAGCTGAAGGACGGCGAGCGGCGCGCGACGTTGACGTTAGCGAGGAAGCCGAGGAATCCCAGGCACTTGATCGTATACGaggcaaaaaaattttgatgcTCATGGACTCGTGTTTGGAAGGCCATTTTTCAAATGACGATGGAACTGAATTAGTGAGATTAGCTTCATGTTGTTTACAGTATGAAACTCGTGAAAGGCCAAATGCCAAGTCACTCGTGACTGCTTTAAGTCCTCTTCAGAAAGAAACTTCGGTGCCATCAAATGTTTTGATGGGCATACCAGATGGGAGTGCGTCAACAAAGGAAACAGTTTCATTGACACCTTTTGGTAATGCTTGTTCTAGAAGAGACTTCACTGCAatacatgaaattttggaaaagGTAGAAAATGAGTATGGATCATATGGAAATGACAAAGCCCTGAAGTTGTTCCTCTTGCAGAATGGGAGTCAGCTTGTGTGTTCAGGGTGTAGAAACCGTCTATTGTATCCTGTTGGAGCCACTTCTGTTTGCTGCGCTGTTTGCAATGCGGTCACAGCAGTGCCACCTCCTGATAACATTGGGAAAGCAAAGAGGAGGCTTGCTACAAGTAAAGAAAGCATTTGA 702 0.4359 MTVRNPSISHYLPESKTFPSTWVTTLKPVNDDEAEGRRAARDVDVSEEAEESQALDRIRGKKILMLMDSCLEGHFSNDDGTELVRLASCCLQYETRERPNAKSLVTALSPLQKETSVPSNVLMGIPDGSASTKETVSLTPFGNACSRRDFTAIHEILEKVENEYGSYGNDKALKLFLLQNGSQLVCSGCRNRLLYPVGATSVCCAVCNAVTAVPPPDNIGKAKRRLATSKESI 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g2435 233 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 50 163 IPR045845 GO:0004672|GO:0009742
Sto3g2435 233 PANTHER PROTEIN KINASE, PUTATIVE-RELATED 50 163 - -
Sto3g2435 233 TIGRFAM LSD1: zinc finger domain, LSD1 subclass 183 213 IPR005735 -
Sto3g2435 233 Gene3D Transferase(Phosphotransferase) domain 1 35 126 - -
Sto3g2435 233 Pfam LSD1 zinc finger 186 210 IPR005735 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g2435 Sto-Chr3 27437562 27440606 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-LSD Sto3g2435 zf-LSD1 3.3e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g2435 - - gmx:732542 183.726