Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g2417 ATGGCTTTGGAGCGAGCTCGTGAGAAGGCCGAGCGAGCTCAAATGCATCAAACAAAATTGGGACTTGGTAAAACGTTGCAAACTATCTCCTTATTGGGTTATTTGCACGAGTTTAGAGGAATCACAGGCCCTCACATGGTGGTTGCTCCAAAATCTACTCTTGGTAATTGGATGAATGAGATTTGA 186 0.4409 MALERAREKAERAQMHQTKLGLGKTLQTISLLGYLHEFRGITGPHMVVAPKSTLGNWMNEI 61
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g2417 61 PANTHER SNF2/RAD54 HELICASE FAMILY 18 61 - -
Sto3g2417 61 PANTHER ISWI CHROMATIN-REMODELING COMPLEX ATPASE CHR11-LIKE 18 61 - -
Sto3g2417 61 Pfam SNF2-related domain 19 61 IPR000330 GO:0005524|GO:0140658
Sto3g2417 61 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 20 61 IPR027417 -
Sto3g2417 61 Gene3D - 9 61 IPR038718 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g2417 Sto-Chr3 27030010 27030500 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SNF2 Sto3g2417 SNF2_N 9.9e-08 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g2417 K11654 - gmx:100791510 89.7373