Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g2402 ATGGATATCTCAATCTCAACTAGTTCAAATTTATTAGACAACAAAATTTCAGCTGAACTTCCTTTGGAGAATGAAGTCACAGAAACAGATTTAACTCCATATGTTGGCATGAAGTTTGAGACTGAAGAACATGCGTATAGATTTTATAATGCATATGCTAGCTTAACTGGATTTAGCATCAGAAGAGAATGGATGAATAAAAGTAAGATAGATCAGAATATTATATTGTTCCGAAATTTTGTATGTTTCAAAGAAGGGTTCAAGAACATAAGTAATTGTGAAGTGAAGAGAGTTCATAAAGATATCAGAACCGGGTGTTCGGCTCAAATGACCATTGGTCGACAATCAAATGGAAAGTATGCGGTTACAAATTTTGAGAAGCAACATAATCATATTCTTGCCACCCCTAGAAGCAGACACAAATTACCATCACAGAGAAAAGTTTCTGCTGCTCGAGCCAATCAAATTGAATTGGCAAAGGATTCTGGCATacgacaaaaattaatttttgagttTTTAAGTCGACAAGTTAGAGGACGAGAAAATGTTGGATGTACTCTTAAGGATGTTAGTAATCATTTGACTTCTAAAAGGATGACAGAAATGGAGGAAGGAGAGGCCTACACTTTGCTTCATTATTTTCAATCAAAGAAATCCACGAACCCATCGTTCTTTTTTGAAATTCAACTTGATGCTGAAGATCAAATCACAAACATTTTTTGGGCAGATGCAAAGATGATTGTAGATTATGTTTGTTTTGGAGATATGGTATCTTTTGATACTACTTATCGCACCAACAAAAAGTCTCAACCCTTTGCACCATTTCTTGGATTCAATCACCATCGGCAAACTGTTATATTTGGTGCAACACTATTATATGATGATACTTCTGAATCATTTGAATGGTTGTTTAAGACTTTTCTTAAGGCCATGTGTGAGAAGAAGCCAAAAACAATTTTTACAGATCAAGATACTGCAATGACAAAAGCAATTTCAGTGGTTTTACCTGAATCATATCATCGTCTATGCACTTGGCATTTATTTCAAAATGCTCTCAAGAATGTTAACCATGCCTTCAAGAAGTCAGATTCTTTTGCTTCCGACTTGAGACGTTGTATTTATGACTACGAGTATGAAGAAGACTTCTTGAACGCTTGGGAGTCAATACTTGATAAGCATGACCTTTTTCAAAATAAGTTGTTAGATGATATGAGATACAAAGAGATAGAGGCTAAGTATGACATGAGTCAAAAAATGCCACCATTGACTTTAGATATCCTTTTACTTAAGAGTGCAAGAGATATCTACACACCAACCATTTATCATCAAGTCTTAGAGGAATATGAGAAGTCTTGTAACATGATATTTAAGGAATGTAATCAAGTTTCAACATTGTTTGAGTATAAAGTATGTCTAATGGGTCATATGAGAGAGCACAATGTTACTTTCAACTCAGAAGATGAAACAGTTGTGTGTAGctgtaaaaaaattgattttgttgGGATCTTGTGTGGCCATGCTCTTCGCGTGCTTAATCATTGGAATAAAATAGTTATTCCCCCAAAATACATTCTCAAGAGGTGGACCAACAATGCTCGAAGTGGATGTGTTCTGGACAACAATGGACACATAATTAAGGAAGATCCTAAATTGGTTGTCACAAATCGTTTCAATGACTTGTGTCGAAATGCAGTTGAGATAGCAAGTATGGCTTCTGAATCTGCTGACGCGTCAACATTTCTTGCAAAAAAATTGGTTGAACTAAGTGTGGAAGTTGATAAAATTTTGACTATGAATTCTTCCATGTCAAGCCAGAAAGATGCATCACTTTCACATGGATCTCAAATTTACATACCTTCAAGTTCTAACACGATTCAAGTTCTAAGTGTTCTACAAATGCCACCTATTGCTTCAAGTCAGCCACAAATTCCACCTAATGAGCCTTAA 1947 0.3482 MDISISTSSNLLDNKISAELPLENEVTETDLTPYVGMKFETEEHAYRFYNAYASLTGFSIRREWMNKSKIDQNIILFRNFVCFKEGFKNISNCEVKRVHKDIRTGCSAQMTIGRQSNGKYAVTNFEKQHNHILATPRSRHKLPSQRKVSAARANQIELAKDSGIRQKLIFEFLSRQVRGRENVGCTLKDVSNHLTSKRMTEMEEGEAYTLLHYFQSKKSTNPSFFFEIQLDAEDQITNIFWADAKMIVDYVCFGDMVSFDTTYRTNKKSQPFAPFLGFNHHRQTVIFGATLLYDDTSESFEWLFKTFLKAMCEKKPKTIFTDQDTAMTKAISVVLPESYHRLCTWHLFQNALKNVNHAFKKSDSFASDLRRCIYDYEYEEDFLNAWESILDKHDLFQNKLLDDMRYKEIEAKYDMSQKMPPLTLDILLLKSARDIYTPTIYHQVLEEYEKSCNMIFKECNQVSTLFEYKVCLMGHMREHNVTFNSEDETVVCSCKKIDFVGILCGHALRVLNHWNKIVIPPKYILKRWTNNARSGCVLDNNGHIIKEDPKLVVTNRFNDLCRNAVEIASMASESADASTFLAKKLVELSVEVDKILTMNSSMSSQKDASLSHGSQIYIPSSSNTIQVLSVLQMPPIASSQPQIPPNEP 648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g2402 648 PANTHER PROTEIN FAR1-RELATED SEQUENCE 12-LIKE 14 403 - -
Sto3g2402 648 PANTHER PROTEIN FAR1-RELATED SEQUENCE 12-LIKE 399 613 - -
Sto3g2402 648 Pfam MULE transposase domain 257 350 IPR018289 -
Sto3g2402 648 Pfam FAR1 DNA-binding domain 47 134 IPR004330 -
Sto3g2402 648 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 399 613 IPR031052 GO:0006355
Sto3g2402 648 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 14 403 IPR031052 GO:0006355
Sto3g2402 648 ProSiteProfiles Zinc finger SWIM-type profile. 479 515 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g2402 Sto-Chr3 26394107 26396359 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sto3g2402 MULE 4.1e-28 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g2402 - K17604 qsu:112018394 595.504