Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g2058 ATGGGCTGTTTTTCGTGTTTCGATTCGAAGGAGGACGAGACGCTTAATCCTCAGCAAGAAACCGATGATCGCAAGCAAGGCCATCCAGCCGTCTCTTCTCACATTTCAAGATTGCCCTCTGGAGCAGACAAGCTTCGCTCAAGAAGTAATGGAGGATCCAAAAGGGAACTGCCTGCCCCTAAGGATGGCCCTGGTGTCCAAATTGCTGCTCAAACTTTTACTTTTCGTGAACTTGCAGCTGCAACTAAGAACTTTAGGCCAGAGTCTTTTATTGGGGAAGGTGGTTTTGGAAGGGTGTATAAAGGTCGCCTGGAAAGCACTGGTCAGGTTGTTGCCGTTAAACAGTTAGATAGAAATGGTCTTCAGGGTAATAGGGAGTTCCTGGTGGAGGTTCTCATGCTTAGTCTTCTACATCACCCTAACCTAGTGAATCTCATTGGTTACTGCGCTGATGGTGACCAACGTCTCCTTGTCTATGAATTTATGCCACTGGGGTCATTGGAAGACCACCTTCATGATCTTCCCCCGGATAAGGAACCACTAGATTGGAACACTAGGATGAAAATAGCAGCTGGTGCAGCAAAAGGATTGGAATACTTGCATGACAAGGCAAATCCTCCGGTCATTTATAGGGACTTCAAGTCATCCAATATATTACTAGAGGAAGGATTTCATCCAAAGCTTTCTGACTTTGGTCTTGCGAAGCTTGGTCCTGTTGGTGATAAGTCACATGTTTCCACCAGAGTTATGGGAACTTATGGTTACTGCGCTCCTGAGTATGCTATGACTGGACAACTGACTGTGAAATCGGACGTCTATAGCTTTGGGGTAGTCTTCTTGGAGCTGATTACTGGCCGTAAAGCCATTGACAGCACCCGGCCCCATGGAGAACAGAACCTTGTGACATGGGCACGTCCATTGTTTAATGACCGGAGGAAGTTCTCAAAGTTGGCAGATCCACGTCTACAGGGGCGGTATCCCATGCGGGGTCTTTACCAAGCATTAGCCGTGGCATCAATGTGTATTCAAGAGCAGGCTGCGACACGTCCTCTGATTGGGGATGTGGTGACTGCTCTGTCTTATCTGGCGAACCAAGCATATGACCCTAGTGTAGGTGGGCATGGTTATAGGGACGATAAAAGGAACAGAGATGAGAGAGGTGGAAGGATATTGAAAAATGAGGAAGGTGGAGGGTCTGGACGCAGATGGGACCTGGAAGGATCAGAGAAAGATGAATCTCCGCGAGAAACTGCAAGGATGCTAAACAGGGATCTAGATAGAGAACGTGCAGTAGCAGAAGCCAAGATGTGGGGGGAGAATTGGAGAGAAAAAAGACGACAAAGTGCACAAGGCAGTTTTGATGCTTCTTAA 1371 0.4748 MGCFSCFDSKEDETLNPQQETDDRKQGHPAVSSHISRLPSGADKLRSRSNGGSKRELPAPKDGPGVQIAAQTFTFRELAAATKNFRPESFIGEGGFGRVYKGRLESTGQVVAVKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEPLDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITGRKAIDSTRPHGEQNLVTWARPLFNDRRKFSKLADPRLQGRYPMRGLYQALAVASMCIQEQAATRPLIGDVVTALSYLANQAYDPSVGGHGYRDDKRNRDERGGRILKNEEGGGSGRRWDLEGSEKDESPRETARMLNRDLDRERAVAEAKMWGENWREKRRQSAQGSFDAS 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g2058 456 Gene3D Phosphorylase Kinase; domain 1 69 161 - -
Sto3g2058 456 SUPERFAMILY Protein kinase-like (PK-like) 69 357 IPR011009 -
Sto3g2058 456 Pfam Protein kinase domain 88 293 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto3g2058 456 ProSitePatterns Protein kinases ATP-binding region signature. 91 114 IPR017441 GO:0005524
Sto3g2058 456 MobiDBLite consensus disorder prediction 1 65 - -
Sto3g2058 456 MobiDBLite consensus disorder prediction 13 30 - -
Sto3g2058 456 MobiDBLite consensus disorder prediction 373 424 - -
Sto3g2058 456 ProSitePatterns Serine/Threonine protein kinases active-site signature. 208 220 IPR008271 GO:0004672|GO:0006468
Sto3g2058 456 CDD STKc_IRAK 91 359 - -
Sto3g2058 456 PANTHER SERINE/THREONINE-PROTEIN KINASE PBS1 1 453 - -
Sto3g2058 456 Gene3D Transferase(Phosphotransferase) domain 1 162 372 - -
Sto3g2058 456 PANTHER OS07G0668900 PROTEIN 1 453 - -
Sto3g2058 456 MobiDBLite consensus disorder prediction 436 456 - -
Sto3g2058 456 ProSiteProfiles Protein kinase domain profile. 85 362 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto3g2058 456 MobiDBLite consensus disorder prediction 371 424 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g2058 Sto-Chr3 17165339 17169888 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g2058 1 446 Glycoside Hydrolase AT3G07070 57.718 4.56e-173 490
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Sto3g2058 Pkinase 9.1e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g2058 K13430 - tcc:18608901 862.833
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g2058 3 17165339 17169888 Sto3g2058 3 17165339 17169888 ECH