Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g2008 ATGGAGATTTTCAAATGCTTGCGCTTTAATATTCCCACCATTTTCATGTTCTTCTTAGCAGTTTTGGCAACTGATCCCTATTCAGAGGCACTCCTGAACCTCAAATCTGAAATATTAGATAATGATAACAGTTTACATGACTGGGTAGTGCTATCTGAAGGAAACTTACCAAGAAAGTCTCATGCATGTTCTTGGTCTGGCATCAAGTGTAATGAGGACTCAACAATTGTTACAGCAATAGACCTGTCTGCGAAGAAACTAGGAGGTGTGATGTCAGGGAAGCAATTTAGTGTCTTCACAAAGCTTGCTAGTTTAAACCTGAGCTACAATTTCTTCTCCGGGCAGCTTCCAGTGTCAATTTTCAACCTCACAGGCCTAGTAAGCTTGGATATCAGCAGAAACAACTTTTCCGGTCACTTTCCAGGAGAAATTTCCAACCTTCAAAATTTAGTGGTTCTTGATGCCTTTAGCAACAGTTTCTCATGGCCATTGCCAGCTGAACTTTCCCAACTTGAACATCTCAAGGTTCTTAATCTAGCAGGAAGTTACTTCAAAGGACCAATTCCATCTGAATTCGGTTCTTTTAGAAGCCTTGAGTTTCTTAATCTTGCAGGAAATTTTCTGTCAGGAAATATACCTTCAGAACTGGGTAACCTCAAAACAGTAATTCACATGGAAATTGGCTACAACTCTTACCATGGTTCTATACCATCCCAACTAGGTAATATGAGCAGGCTTCAGTATCTTGATATAGCTGGTGCAAATCTATCCGGTCCATTGCCAACCCAGCTCTCCAATCTCACCAATTTGCGATCACTTTTCCTTTTCACAAACCAGCTCACAGAATCAATACCTAGTGAATTTAGCAGAATCAAGCCTCTCAtggatttagatctttctgacAATCTCATTTCTGGGTCCATTCCTGAAAGCTTTTCAGAGTTGAAGAACCTAAGATTGCTCAGTCTCATGTATAATGATATGAATGGCACTGTTCCAGAAGGCATTGCACAACTTCCATCCTTGGAAACTCTTCTTATTTGGAACAACCGCTTTTCTGGATTACTCCCACAAAGCTTGGGCAGGAACTCAAAACTCAAGTGGGTGGATGCTTCCACTAATAATTTGATTGGCAGCATACCACCAGATATTTGTGTGAGAGGAGCACTACATAAGCTAATCCTGTTCTCAAACAGATTTACAGGTGGTCTTCCATCGTCACTCTCTAATTGTTCTTCCCTTGTTCGCCTTCGACTAGAAGATAATTCATTGTCAGGAAAGATTTCTTTGAAATTCAGACATCTTCCTGATATTTCATACGTTGATCTGTCCCGGAACAAGTTTGTTGGTGGAATTCCCTCTGATATTTCCCGAGCTAATAAACTAGAGTATTTCAATGTCAGTTATAATATGCAATTGGGAGGCGTCATCCCTACACAAATATGGTCTTTGCCACTTCTTCAAAACTTCTCAGCATCTTTTTGCAGTATTTTAGGCTTTCTTCCGCCATTTGAGCCCTGCAAAACAATTTTTGTTATTGAACTGGATAGGAACAAATTATCGGGAAGTGTCCCAAACAGTGTATCCAATTGCCATGCTCTGGAGTACATAAACTTATCCAACAATAATCTATCAGGTCATGTACCTAAGGAGCTTGCAAGTATCACTGCTCTTGGCATTATAGACCTATCAAGTAATAACTTCAATGGCTCAATACCAGCTAAGTTTGCTAGATCTTCAAGTTTACAACTTCTTAATGTCTCTTTCAACCACATCTCCGGTTCAATTCCCAGAGGAAAGTCCTTCAAAACAATGGATAGGAGTGCATTTGTTGGAAATTCAGAGCTATGTGGAATACCTTTGCGACCATGCCTTGATTCAGTTGGAATATTAGGAAGCAAAGGCACATGGAAGCTATCACTTATTGTGCTACTCTGTGCTGGGTTGTTAATACTTCTTCCTGCGTTAGCTTTTGGGTTACTTCATTTCACACAGGGAATTGGAAGTCAATGGAAGATGGTCTCATTTGTTGGACTCCCTCAGTTCACAGCAAATGATGTTTTGACAAATTTAAGTGCCACAGAATCCAGAGAGGTGCTAACCCCATCACCATCACTTTCAAAAGCTGTTCTGTCAACAGGAAACACAGTTTTAGTTAAGAAGATTGAATGGGAAGCGAGAAGCATTAAGATAGTGTCAGAATTTATAATGCGACTGGGAAATGCAAGGCACAGGAATATAATCAGACTGTTGGGCTTTTGCCATAACCAGCAAGAAGCTTATCTTTTATATGATTACCTAGCCAATGGGAATTTGGCTGAGAGAGTTGGAATAAGATGGGATTGGGCAGAAAAATTCAGGGTTGTAGTAGGCATTGCACGAGGACTTCGCTTCCTTCATCATGAATGTTATCCAGCTATACCCCATGGAGACTTGAAGTTAAGCAACGTCATATTTGATGAAAATATGGAACCCCACTTGACAGAATTTGGGTTCAAACACATTTTAAAGTTGACCAAAGGCTTGTTTCCAACAATTTCTTACCAAGAAACAGAATACAATGAAGGCATGAGAGAGGAACTCAACATGGATGTCTACAATTTTGGGGAAATGATTCTGCAAATTTTATCCAGTGGGAGGATGACAAGTGTAGCCGCTAGTATTTACAGCAAGCCAAGGGAAGTTCTTCTAAGGGAAATTTACAATGAGAATGATATGAGTTCTGCCAACTCAGTACAGGAGATAGAACTAGTTCTTGAAGTTGCATTGCTTTGCACTAGAAGCAGGCCGTCTGATCGGCCATCCATGGAAGAAGCTTTAAAGCTTTTACAAGGGTCAAAGAAGCTGGTAGATAGCAGAACTTCTACGGAAGGTTAG 2877 0.4008 MEIFKCLRFNIPTIFMFFLAVLATDPYSEALLNLKSEILDNDNSLHDWVVLSEGNLPRKSHACSWSGIKCNEDSTIVTAIDLSAKKLGGVMSGKQFSVFTKLASLNLSYNFFSGQLPVSIFNLTGLVSLDISRNNFSGHFPGEISNLQNLVVLDAFSNSFSWPLPAELSQLEHLKVLNLAGSYFKGPIPSEFGSFRSLEFLNLAGNFLSGNIPSELGNLKTVIHMEIGYNSYHGSIPSQLGNMSRLQYLDIAGANLSGPLPTQLSNLTNLRSLFLFTNQLTESIPSEFSRIKPLMDLDLSDNLISGSIPESFSELKNLRLLSLMYNDMNGTVPEGIAQLPSLETLLIWNNRFSGLLPQSLGRNSKLKWVDASTNNLIGSIPPDICVRGALHKLILFSNRFTGGLPSSLSNCSSLVRLRLEDNSLSGKISLKFRHLPDISYVDLSRNKFVGGIPSDISRANKLEYFNVSYNMQLGGVIPTQIWSLPLLQNFSASFCSILGFLPPFEPCKTIFVIELDRNKLSGSVPNSVSNCHALEYINLSNNNLSGHVPKELASITALGIIDLSSNNFNGSIPAKFARSSSLQLLNVSFNHISGSIPRGKSFKTMDRSAFVGNSELCGIPLRPCLDSVGILGSKGTWKLSLIVLLCAGLLILLPALAFGLLHFTQGIGSQWKMVSFVGLPQFTANDVLTNLSATESREVLTPSPSLSKAVLSTGNTVLVKKIEWEARSIKIVSEFIMRLGNARHRNIIRLLGFCHNQQEAYLLYDYLANGNLAERVGIRWDWAEKFRVVVGIARGLRFLHHECYPAIPHGDLKLSNVIFDENMEPHLTEFGFKHILKLTKGLFPTISYQETEYNEGMREELNMDVYNFGEMILQILSSGRMTSVAASIYSKPREVLLREIYNENDMSSANSVQEIELVLEVALLCTRSRPSDRPSMEEALKLLQGSKKLVDSRTSTEG 958
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g2008 958 Pfam Leucine rich repeat N-terminal domain 29 71 IPR013210 -
Sto3g2008 958 PANTHER UNNAMED PRODUCT 7 948 - -
Sto3g2008 958 Gene3D Ribonuclease Inhibitor 26 146 IPR032675 -
Sto3g2008 958 ProSiteProfiles Protein kinase domain profile. 671 950 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto3g2008 958 Gene3D Ribonuclease Inhibitor 147 224 IPR032675 -
Sto3g2008 958 ProSitePatterns Serine/Threonine protein kinases active-site signature. 807 819 IPR008271 GO:0004672|GO:0006468
Sto3g2008 958 Pfam Leucine rich repeat 268 327 IPR001611 GO:0005515
Sto3g2008 958 SUPERFAMILY Protein kinase-like (PK-like) 708 946 IPR011009 -
Sto3g2008 958 Gene3D Ribonuclease Inhibitor 225 474 IPR032675 -
Sto3g2008 958 Gene3D Ribonuclease Inhibitor 475 628 IPR032675 -
Sto3g2008 958 Gene3D Phosphorylase Kinase; domain 1 704 764 - -
Sto3g2008 958 SMART serkin_6 682 943 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto3g2008 958 Gene3D Transferase(Phosphotransferase) domain 1 765 956 - -
Sto3g2008 958 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE 7 948 - -
Sto3g2008 958 SUPERFAMILY RNI-like 80 401 - -
Sto3g2008 958 SMART LRR_typ_2 339 362 IPR003591 -
Sto3g2008 958 SMART LRR_typ_2 99 123 IPR003591 -
Sto3g2008 958 SMART LRR_typ_2 195 219 IPR003591 -
Sto3g2008 958 SMART LRR_typ_2 267 290 IPR003591 -
Sto3g2008 958 Pfam Protein kinase domain 711 941 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto3g2008 958 SUPERFAMILY L domain-like 369 624 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g2008 Sto-Chr3 16504109 16507472 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g2008 16 943 Receptor kinase-like Gene Family AT5G51350 52.866 0.0 919
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Sto3g2008 Pkinase 1.8e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g2008 - - aprc:113852384 1418.68