Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g1977 ATGTTGCTTTGGAAGGTTGGTGATTTAGGTCTATCCAAAGTGAAATGCCAGACACTGATCTCCGGTGGTGTGCGAGGAACACTGCCTTGGATGGCTCCAGAACTATTGAATGGAAGCAGTAGCCTTGTTTCAGAAAAGGTTGATGTGTTTTCATTTGGTATTGTGATGTGGGAAGTCCTCACTGGGGAGGAGCCATATGCTGATTTGCACTACGGTGCTATTATAGGTGGTATTGTGAGCAACACTTTGCGGCCTCCAGTTCCAGAGTCTTGTGATCCAGAATGGATATCGCTGATGGAGCGTTGCTGGTCGTCGGAGCCATCAGAAAGACCGAACTTCACTGAGATTGCTAATGAATTACGCTCCATGGCAGCCAAGAGTCCTCCCAGAGGACAGGGTCAACAGCAGCAACCCTCTTCATTGCTGACTCAAATACAGAAATGA 444 0.4775 MLLWKVGDLGLSKVKCQTLISGGVRGTLPWMAPELLNGSSSLVSEKVDVFSFGIVMWEVLTGEEPYADLHYGAIIGGIVSNTLRPPVPESCDPEWISLMERCWSSEPSERPNFTEIANELRSMAAKSPPRGQGQQQQPSSLLTQIQK 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g1977 147 MobiDBLite consensus disorder prediction 120 147 - -
Sto3g1977 147 SMART tyrkin_6 1 120 IPR020635 GO:0004713|GO:0006468
Sto3g1977 147 ProSiteProfiles Protein kinase domain profile. 1 124 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto3g1977 147 PANTHER KINASE SUPERFAMILY WITH OCTICOSAPEPTIDE/PHOX/BEM1P DOMAIN-CONTAINING PROTEIN 5 127 - -
Sto3g1977 147 Pfam Protein tyrosine and serine/threonine kinase 5 120 IPR001245 GO:0004672|GO:0006468
Sto3g1977 147 SUPERFAMILY Protein kinase-like (PK-like) 4 119 IPR011009 -
Sto3g1977 147 MobiDBLite consensus disorder prediction 128 147 - -
Sto3g1977 147 Gene3D Transferase(Phosphotransferase) domain 1 2 147 - -
Sto3g1977 147 PANTHER SERINE-THREONINE PROTEIN KINASE 5 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g1977 Sto-Chr3 16195539 16196279 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g1977 3 140 MAP Kinase Kinase Kinase AT3G46920 80.435 2.11e-74 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Sto3g1977 PK_Tyr_Ser-Thr 2.7e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g1977 - - peu:105121118 257.684