Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g1955 ATGACTGAAGCAAAGAATGCTGTGGAGAATTATTTGTTCAACGTCAAGGATGCTATCAATGAGATTTCCTCGTGTCTTCCCCAAGTCGACAAGAAGCGGACTAAGGATGCGATTGAGCAGACCATAGCATGGATTAAAGCTAACTCAAATGCAAATTTTGAAGAGTTGGTGCGCAAGATGGAAGAACTTGAGAGTGTATTGAATCCCATCATAACGAAGGCGATGGAGGAGGACAAAGTGGATAAAGCTGATCTTGGCACAAGTAGAAGCAGTAATGTCTCCACTGGAACTAGGAGAAGCAAGACAGATATGGTATTAAAATGGTCGGGACTTGCTTTGTCTACAAGTATTTCACTCTTAAATTTTGATTTGGGTGAAATGGCTTCATGTTTATCAGAAATTATGGGTCTGATATGTGCTTATGATAGTGTCTACCGAGCACTAATTCATACTGGCAAAATTGTTGCTTTAAAGAAACTCCACAAGTTGGAATTTGAAAACCCAACTTTCGACAAAAGTTTTCGCAATGAGACGAAAATGTTGACAGAGATCCGTCATCGGAACATTGTGAAACTCTATGGTTTTTGTTTGCACAATAAAAACATGTTTCTTGTCTACGAATAG 624 0.391 MTEAKNAVENYLFNVKDAINEISSCLPQVDKKRTKDAIEQTIAWIKANSNANFEELVRKMEELESVLNPIITKAMEEDKVDKADLGTSRSSNVSTGTRRSKTDMVLKWSGLALSTSISLLNFDLGEMASCLSEIMGLICAYDSVYRALIHTGKIVALKKLHKLEFENPTFDKSFRNETKMLTEIRHRNIVKLYGFCLHNKNMFLVYE 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g1955 207 PANTHER FLAGELLIN-SENSING-LIKE PROTEIN 140 207 - -
Sto3g1955 207 Gene3D Phosphorylase Kinase; domain 1 133 207 - -
Sto3g1955 207 SUPERFAMILY Protein kinase-like (PK-like) 141 207 IPR011009 -
Sto3g1955 207 Gene3D - 1 103 IPR029048 -
Sto3g1955 207 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 140 207 - -
Sto3g1955 207 ProSiteProfiles Protein kinase domain profile. 79 207 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto3g1955 207 Pfam Protein kinase domain 142 207 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto3g1955 207 Coils Coil 46 66 - -
Sto3g1955 207 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 3 79 IPR029048 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g1955 Sto-Chr3 15932673 15935113 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g1955 3 73 Calmodulin-binding Proteins AT5G02500 49.315 4.52e-16 74.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Sto3g1955 Pkinase 6.8e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g1955 - - qsu:112016732 112.079