Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g1925 ATGGAATGTAATAAAGATGATGCTATGAGGGCTAAGGAACTTTCAGAGAAGAAGTTTCTAGAGATGGACTTTGCTGGTGCGAAAAGATTTGCCTTGAAGGCTCAAGACTTGTATCCTTGTCTTGATGGTCTCTCTCAACTGCTAGCAACTCTTGAGGTGTACGTCTCTgctgagaaaaaaataaatggagAAGTTGATTGGTACGAGGTCCTTGGTGTGGATCCCTTGGCTGATGACGAAACAATTCGAAGGCGTTATAGGAAATTGGCTCTTGCTCTACACCCTGATAAAAACAAATCAGTAGGCTCGGATGGGGCTTTTAAACTTATCTCTCAAGCATGGAGTTTGTTTTCTAATAAGTCCAAGAGATTCTTCTATGACCAGAAGCGCAATTTAAGGGGTATATATGAAGGAATTTCAAATGGGAAGCCTTCAGGACCAGCAAATCAGAAtggtttctttaatttcttcaacaCTGCTAACTGGAAGGATGCAAATCATAGAACTGCTGCTCATCCTGAACCTACTCCATCATCACCTGTGTCATTGAAACAGACATTCTGGACCATATGCGGTGCTTGCAGGACACAGTTTGAGTACCCTGGAGTTTATCTCAACTGCAATCTTATATGCAACTGCTGCCATAAGCCCTTTTTGGCTTCAGAGATACCAGCACCACCTATGCACCACAATGCTCCGTTCACTCACAATCCGAAGAAGAAATTTAAATCAACCAGACtggaagaaaataattttatttctagAAGGATGCCAACTTCTTCTATTAACTCCTGTTCTTTCTCTATGCCTGGTGGTATTTCTAGTGTCCAGACATCAGCTTCTTCTGCTGCTGAAGCTCTTGGTGCTTTTGGGGTGTCATCTGAGCATTTGAAGAGAGGTCATGAAGATGCACCAGTTAAGCGGGGAGAGATCCATTGTGGGAACTCTGATGCTACTAAGACAACTGCTTCAAGTTTAGCTTTTCACTCCACTTGTTTCAGTTCCAATTCAGTCCTGAAAGGAGATAGGCCAAGGAAAAGAAAGACTATTGATGAATGTAGAGTTGATAGGGAAAAACAAGAGGTAGAAACCAAAATGGCATCTCAAACTGAGGGGAAAAGGTTAGCTGCAGAACTTGGATCTAAGAAGGGTAGTATTGAGATAGGAAGGGTTAATGCTGCTGCAAACTGTAAACGTAATGGTATGAGGGATTTaccacaacaacaattaaagatCATGTTGATGGAAAAGGCTAGGAATAGTATTCGTAGTAAGCTTAATGAGTGGAATGCTGCTTCTGTATCTAGGAAGTTGACCGAGCAAGAAAAACCTGCTAAGGAAGTAAGAGAGAAGGacaatgaaagggaaagaaatgctGAAAAACATGGTGCAGAAGAATTTGTTGACTCCAAGACCATAGCCAAAAAGTCCCCCTCTGCTGATCCTGATATCTCTACTTTGAAGGTGGCTGATTCTCTCACTATGAGTGTTCCAGACCCAGACTTTCATGATTTTGACAATGACCGAACAGAGAAATCATTTGGTGAGAACCAGGTATGGGCTGCTTATGACGATGATGATGGCATGCCTCGTTACTATGCTTTGATTCATAGTGTTATTTCCTTAAAACCATTCAAATTGAGGATGAGTTGGCTTAACTCTAAAAGCAATGATGAGCTTGCTCCAATAAAGTGGGTCAGTTATGGTTTTCCAAAGACTTCTGGAGATTTTCGAATAGGCAAGTATGAGTTTAATGGCTCTCTTAATTCTTTCTCACACAGAATTAAGTGGACCAAAGGTGCTAGAGGGGTTGTACACATATACCCTAAGAAGGGGGATGTTTGGGCTCTATATAGAAACTGGTCCCTTGATTGGAATGAACTCACTCCAGATGACATTGTACAAAAATATGACATGGTGGAAGTGCTTGAAGACTACAATGAGGAGCGAGGTGTGAATGTTGCTCCACTTGTCAAAGTTGCTGGCTTCAAGACAGTATTCCGTCGACATGTAGATCCAAGTAAAATCAAGAGCATCCCAAGGGAAGAGATGTTTCGTTTATCACACCAGGTACCTTCATTCTTGCTGACTGGTCAAGAAAGTCATAATGCCCCTAGAGGTTGCTTGGAGCTTGATCCTGCTGCTATGCCTATGGAACTTCTTGATCTGGGAAAAGAAGATCCAAAGCAGGAGGCAGAAAATTCAGAAGACAGATTGGGGCTCAGAGAAAGTTCAGTAGAAGATATTCAAAGGAAGGTGGTGGATGAAACAATGAGAAAGGAGAATAGGCTGGAGAACTTGATCGTGTATACCCGGAAACGAGTGAGGGATAAGAAAGTGCTTGGAGTGGCAATTGTGGAGTTGCCTTTAAATACTATAGCTTCAGCTGTATCGTCTTTAGCTTGA 2406 0.4048 MECNKDDAMRAKELSEKKFLEMDFAGAKRFALKAQDLYPCLDGLSQLLATLEVYVSAEKKINGEVDWYEVLGVDPLADDETIRRRYRKLALALHPDKNKSVGSDGAFKLISQAWSLFSNKSKRFFYDQKRNLRGIYEGISNGKPSGPANQNGFFNFFNTANWKDANHRTAAHPEPTPSSPVSLKQTFWTICGACRTQFEYPGVYLNCNLICNCCHKPFLASEIPAPPMHHNAPFTHNPKKKFKSTRLEENNFISRRMPTSSINSCSFSMPGGISSVQTSASSAAEALGAFGVSSEHLKRGHEDAPVKRGEIHCGNSDATKTTASSLAFHSTCFSSNSVLKGDRPRKRKTIDECRVDREKQEVETKMASQTEGKRLAAELGSKKGSIEIGRVNAAANCKRNGMRDLPQQQLKIMLMEKARNSIRSKLNEWNAASVSRKLTEQEKPAKEVREKDNERERNAEKHGAEEFVDSKTIAKKSPSADPDISTLKVADSLTMSVPDPDFHDFDNDRTEKSFGENQVWAAYDDDDGMPRYYALIHSVISLKPFKLRMSWLNSKSNDELAPIKWVSYGFPKTSGDFRIGKYEFNGSLNSFSHRIKWTKGARGVVHIYPKKGDVWALYRNWSLDWNELTPDDIVQKYDMVEVLEDYNEERGVNVAPLVKVAGFKTVFRRHVDPSKIKSIPREEMFRLSHQVPSFLLTGQESHNAPRGCLELDPAAMPMELLDLGKEDPKQEAENSEDRLGLRESSVEDIQRKVVDETMRKENRLENLIVYTRKRVRDKKVLGVAIVELPLNTIASAVSSLA 801
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g1925 801 Pfam Domain of unknown function (DUF3444) 493 700 IPR024593 -
Sto3g1925 801 CDD DnaJ 66 119 IPR001623 -
Sto3g1925 801 PANTHER BNAC03G44070D PROTEIN 1 736 - -
Sto3g1925 801 MobiDBLite consensus disorder prediction 435 481 - -
Sto3g1925 801 ProSiteProfiles dnaJ domain profile. 66 130 IPR001623 -
Sto3g1925 801 PANTHER HEAT SHOCK PROTEIN-LIKE 1 736 - -
Sto3g1925 801 Pfam DnaJ domain 66 127 IPR001623 -
Sto3g1925 801 SUPERFAMILY Chaperone J-domain 60 126 IPR036869 -
Sto3g1925 801 SMART dnaj_3 65 122 IPR001623 -
Sto3g1925 801 PRINTS DnaJ domain signature 68 86 IPR001623 -
Sto3g1925 801 PRINTS DnaJ domain signature 86 101 IPR001623 -
Sto3g1925 801 PRINTS DnaJ domain signature 102 122 IPR001623 -
Sto3g1925 801 MobiDBLite consensus disorder prediction 439 472 - -
Sto3g1925 801 Gene3D DnaJ domain 64 171 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g1925 Sto-Chr3 15566550 15569226 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g1925 4 228 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 30.603 1.86e-27 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g1925 - - gmx:100797672 862.448
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g1925 3 15566550 15569226 Sto3g1925 3 15566550 15569226 ECH