Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g1894 ATGAGAAGAACATTTGCTGCTTGGATTTGCACCAGCATATGCCCTCACTGCTTACCTTCTCATCGCCTCCATCGTCTTCTTCAGGTCCGTCGTTACGTCTATCACGACGTCGTCAGATTGGAAGATCTTCAAAAACTCATTGATTGCTCCAATGTTCAGAAGCCTCCAAGAACCTTTCATCCATTGCTCCCTAGGTTGcaagCCTCTTCTGGTGGGTCTGAGAATAATAAGGTTGTTTCCACTCGTAGTCATGAGATcgtgaggaagaagagaagTGGGTGGAATGTGTGTGCCAGATTGATGTCCTCCAACAATAATAAGGTTTCCGATGAAGACGTCGCCACCGGCATCAGCAGAAGAAAAGGCATCCCTCATCGATCTCCGCTCTGTTAA 393 0.4427 MRRTFAAWICTSICPHCLPSHRLHRLLQVRRYVYHDVVRLEDLQKLIDCSNVQKPPRTFHPLLPRLQASSGGSENNKVVSTRSHEIVRKKRSGWNVCARLMSSNNNKVSDEDVATGISRRKGIPHRSPLC 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g1894 130 MobiDBLite consensus disorder prediction 108 130 - -
Sto3g1894 130 Pfam PLATZ transcription factor 30 54 IPR006734 -
Sto3g1894 130 PANTHER - 9 53 - -
Sto3g1894 130 PANTHER - 68 130 - -
Sto3g1894 130 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 9 53 - -
Sto3g1894 130 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 68 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g1894 Sto-Chr3 15262778 15264649 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Sto3g1894 PLATZ 4.2e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g1894 - - gmx:100781564 97.4413