Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g1882 ATGGAAGCCATGAAGCAGAAATGCAAGAGAATGTGGGGGCGATGCAGGAGATGCCACGTGTCCTACAACATATTTTCATCAACGAAGAAACGACGTCGTGGTGGTGGGGCCGCGGTGGCTCCGGAGGGATGCCTCTGGGTGGAGGTGGGGCCCACGAGGGAGAGGTTCGTGATGAGGGTAGAGCTCGCGAACCACCCCACGTTCAAGACGCTCCTCAACGACGTCGCGGAGAGCGAGTACGGGTTCGCCGGCGCCAATCGCGGCGGCGGTCCGATCTGGCTTCCCGATTGCGACGCCGACTCGTTCGGCCGCGCGCTGGCCGGGATGGAGACGGAGACGGAGACAATGGAGGAAGATAGCTCTTCTTGGGGCTGTAGGTTTCGGTTATATGCTAAGAGTTGTCCCAATTCGGCACAAATGCAGCTTTTTACTGCTAAAATTGTGGACTTGATGAACCAACATAAACTCTTCGCGTCTCagAGAGGTGGGGCAGGTGCTACAACAATGGCTGTTCCTCTACCATTTGCAAAATTCTATCaaaagacgaagaagaagaaaatggagggTTGA 570 0.5316 MEAMKQKCKRMWGRCRRCHVSYNIFSSTKKRRRGGGAAVAPEGCLWVEVGPTRERFVMRVELANHPTFKTLLNDVAESEYGFAGANRGGGPIWLPDCDADSFGRALAGMETETETMEEDSSSWGCRFRLYAKSCPNSAQMQLFTAKIVDLMNQHKLFASQRGGAGATTMAVPLPFAKFYQKTKKKKMEG 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g1882 189 PANTHER SMALL AUXIN-UP RNA-RELATED 1 136 - -
Sto3g1882 189 Pfam Auxin responsive protein 24 107 IPR003676 GO:0009733
Sto3g1882 189 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 1 136 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g1882 Sto-Chr3 15108519 15113386 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g1882 40 124 Calmodulin-binding Proteins AT4G34750 41.176 2.08e-09 52.4