Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g1874 ATGGCTCCTAAACAACCAAGTACGGGTCTGTTTGTGGGATTGAACAAAGGGCATGTAGTGACCAAGAAGGAATTGGCTCCACGCCCCTCAGATCGCAAAGGGAAAACTAGCAAGCGTGTTCATTTTGTGAGGAACCTGATTCGTGAGGTTGCGGGGTTTGCTCCTTATGAAAAAAGGATAACTGAGCTTTTAAAAGTTGGGAAGGACAAGCGAGCTCTGAAAGTTGCAAAGAGAAAGTTGGGAACCCATAAGAGGGCTAAGAAGAAGCGTGAGGAGATGTCAAATGTTCTCCGGAAGATGAGGTTATCCTag 312 0.4583 MAPKQPSTGLFVGLNKGHVVTKKELAPRPSDRKGKTSKRVHFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKMRLS 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g1874 103 MobiDBLite consensus disorder prediction 79 103 - -
Sto3g1874 103 Pfam Ribosomal protein L36e 8 101 IPR000509 GO:0003735|GO:0005840|GO:0006412
Sto3g1874 103 ProSitePatterns Ribosomal protein L36e signature. 55 65 IPR000509 GO:0003735|GO:0005840|GO:0006412
Sto3g1874 103 MobiDBLite consensus disorder prediction 87 103 - -
Sto3g1874 103 Gene3D 60S ribosomal protein L36 1 103 IPR038097 -
Sto3g1874 103 PANTHER 60S RIBOSOMAL PROTEIN L36 1 101 IPR000509 GO:0003735|GO:0005840|GO:0006412
Sto3g1874 103 PANTHER 60S RIBOSOMAL PROTEIN L36-1-RELATED 1 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g1874 Sto-Chr3 15000375 15001481 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g1874 1 101 Cytoplasmic Ribosomal Protein Gene Family AT3G53740 84.158 1.43e-55 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g1874 K02920 - csin:114315279 199.904