Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g1839 ATGAGGAGTGTTATTGTTATAGTTATAGTTAgtgaggttttaatgtgtttggtaggcggtgagaagttccaaattagagtggatcctctaaaAGGATATCAAAACCCAAGATTTGTGATAGTAAAACTGACCCACATTCCCCAGCTGCTTAGCCCAATGGTGGACCTCACCTCCGCCGCCGTACGACGGCCCATGGACAGAGGCTACCTGATAAACCCTGACCTCCAGCGAGAGGTATGGGCGCACCTCTTCTCCTCTATCCTCCACATCAACCCTTCACAGTCTTCACTCCTCCTCACCGAACCCCTCTTCACCCTTCCTTCCATTCAGCGTTCCATTGACGAGCTTGTCTTCGAGGATTTCAACTTCAAGTCCCTCTATGTGGCGGATTCTCCATCCCTGGCTCATATCTATGAGGCTAGTCGAAGGCCTGATGGTCTTGTCTCGAGGGCTCAGTGCAGCCTCGTTGTGGATTGTGGGTTTTCATTCACGCACGCCTCCCCTGTGTTTCAGAACTTCACGTTGAACTACGCTGTGAAGAGAATTGATTTGGGTGGGAAAGCATTGACCAATTATCTCAAGGAGTTGGTTTCTTTTCGGGCTATTAATGTTATGGAGGAGACTTTTATTATTGATGATGTTAAAGAGAAGCTCTGCTTTGTGTCCCTTGATGTACACCGTGACCTTCAGATCGCGAGGAAGCCTGGAAAAGAAAATCTCTTTAGGTCCACATATGTCCTTCCGGATGGTATTACGCATACAAAGGGCTTTGTCAAATATCCAGATCAGGCACAAAGATATCTTACTTTGACCGATAATGCTTCTACTTCTTCTCTAGCTGAAACAAAGGAGGATAGGAGCTATCCAGAAATGAATGAGAAGCCTGAGGATAGAAGGAGAATTGATTTAACAAAAAATGAATTTGACTTGACAAATGAGCGGTTTCTTGTTCCAGAGATGATCTTCCATCCTGCTGATCTAGGAATGAATCAGGCTGGACTGGCAGAATGCATTGTCAGAGCTGTTAACTGCTGCCCTCAACAACTCCACCCTGTACTTTATGAAAGCATCATTTTAACAGGTGGAAGCACTTTATTTCCTCAATTTACTGAGAGATTAGAGAGGGAGCTCCGGCCTCTAGTTCCTGATGACTATCATTTGAAGATCACTCCTCAAGAAGATCCTCTATTAGGTGTTTGGCGTGGAGGATCGCTGTTGGCATCTAGTCCAGATTTTGAAGCAATGTGTGTGACCAAGTCTGAATATGAGGAGCTTGGTTCTGCTAGATGTCGCAAGAGATTCTTCCACTGA 1311 0.4333 MRSVIVIVIVSEVLMCLVGGEKFQIRVDPLKGYQNPRFVIVKLTHIPQLLSPMVDLTSAAVRRPMDRGYLINPDLQREVWAHLFSSILHINPSQSSLLLTEPLFTLPSIQRSIDELVFEDFNFKSLYVADSPSLAHIYEASRRPDGLVSRAQCSLVVDCGFSFTHASPVFQNFTLNYAVKRIDLGGKALTNYLKELVSFRAINVMEETFIIDDVKEKLCFVSLDVHRDLQIARKPGKENLFRSTYVLPDGITHTKGFVKYPDQAQRYLTLTDNASTSSLAETKEDRSYPEMNEKPEDRRRIDLTKNEFDLTNERFLVPEMIFHPADLGMNQAGLAECIVRAVNCCPQQLHPVLYESIILTGGSTLFPQFTERLERELRPLVPDDYHLKITPQEDPLLGVWRGGSLLASSPDFEAMCVTKSEYEELGSARCRKRFFH 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g1839 436 Gene3D Actin; Chain A, domain 4 184 331 - -
Sto3g1839 436 SUPERFAMILY Actin-like ATPase domain 152 435 IPR043129 -
Sto3g1839 436 PANTHER ACTIN-RELATED PROTEIN 6 54 432 IPR030054 GO:0005634|GO:0006338
Sto3g1839 436 Pfam Actin 57 435 IPR004000 -
Sto3g1839 436 SMART actin_3 2 435 IPR004000 -
Sto3g1839 436 Gene3D - 59 426 - -
Sto3g1839 436 PANTHER ACTIN 54 432 IPR004000 -
Sto3g1839 436 Gene3D - 132 398 - -
Sto3g1839 436 CDD NBD_sugar-kinase_HSP70_actin 78 196 - -
Sto3g1839 436 SUPERFAMILY Actin-like ATPase domain 55 137 IPR043129 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g1839 Sto-Chr3 14600289 14606609 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g1839 61 435 Cytoskeleton Gene Families AT3G12110 26.790 4.17e-46 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g1839 K11662 - gmx:100819827 647.121
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g1839 3 14600289 14606609 Sto3g1839 3 14600289 14606609 ECH