Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g1757 ATGGCCTCCACCATCGTCACACCCAGAGACGAATCCGACAACGACAGCTTCAGCAGCcgcaaccaccaccaccaccgcagCAGCAGCAGCTCCCACTCCGCTTGTTCCTCCGCCaccgccgccaccaccaccagcTCCCGCAGTACCCATAAGCCCCACAAGGCGGCCAACGAGGACGCGGCATGGGAGGCCATGCGGCGGCTCCGTCTCCGCAAGGGCCCGCACCCGGTGGGGCTGGAGGACTTCCGCGTGGTGCGGCGGCTGGGGGGCGGGGACATGGGGAACGTGTACCTTTGCCGCATAAGGAAGGCAGCGCCGGCGGCGCGTGGatatggtgatgatgatgatgatgagcacGTGTACTATGCGATGAAGGTGGTGGATAGAGAAGCGGTTGCGATGAGGAATAAGCTAAAGAGAGCTGAGATGGAGAAGGAGATTCTGAGTATAGTCGATCATCCTTTTTTGCCGACTTTATACGCTGAATTCGAAGCTTCTCATTTTTCTTGCTACCTCATGGAGTTTTGCCCCGGCGGAGACTTGTACGCGGCTCGCCTTCGTCAACCCGGAAGCCGCTTCTCCGTATCTTCCGCTAAGTTTTACGCAGCAGAGATAGTAGTAGCACTAGAGTATCTGCACATGATGGGCATAGTGTACAGAGACTTAAAGCCCGAGAACGTATTGGTCAGACACGACGGTCACATCATGCTCTCCGACTTCGACCTCTCTCTCAAAACCGACGTCGTTCCCAAGCTCCTCCTCACACCCAAAACGACGTCGTCGTCCCCATCCCCACCCCCCTCCTCCTCGCCACTCCTATCCTGTTTCTCAACAAAACCACGACGACACAAAACGACGCCGTCCTCCTCCTCCTCGAGCGCGGTCGTGGTAGTAGTGGCGGAGCCCACGAGCACCACCACCCGATCCAAATCCCTAGTCGGGACCCACGAGTACTTGGCTCCGGAGGTGATATCGGGGGAGGGACACGGGGGCGAAGTGGATTGGTGGACGCTGGGGGTGCTCCTGTACGAGCTGCTGTACGGGATCACGCCCTTCAAAGGGGAGACCAACGAGAGGACGCTGAGGAATATTATGAAGCAACCCGTGAGGTTTCCGAAGACGAAGATGAAGGAGAGGGATGATCGTGAGGAGATGAAGGTGGTGGAGGATCTGATAAGGAAGCTTTTGGTGAAGAATCCGAAGAAGAGGATGGGAAGCTGGATGGGGGCGGCGGAGATCAAGAGGCACGAGTTCTTCGAGGGTGTGAATTGGGCCTTGATTAGATGGGCCGGGCCTCCGGAGGTGCCGCCCAGTGGGAATTATTGTAGGGGTTTTGATTTGAAGAAGAAGGGTAATAGTGGAGTTTTGGTGCCgaaaggaaggaaggagaaggagaggggTAATAATAATGAAGCGTTTCGGATTACTAGTGGTGGTGGTCATTATCATCATTTTGACTACTTCTAA 1467 0.5228 MASTIVTPRDESDNDSFSSRNHHHHRSSSSSHSACSSATAATTTSSRSTHKPHKAANEDAAWEAMRRLRLRKGPHPVGLEDFRVVRRLGGGDMGNVYLCRIRKAAPAARGYGDDDDDEHVYYAMKVVDREAVAMRNKLKRAEMEKEILSIVDHPFLPTLYAEFEASHFSCYLMEFCPGGDLYAARLRQPGSRFSVSSAKFYAAEIVVALEYLHMMGIVYRDLKPENVLVRHDGHIMLSDFDLSLKTDVVPKLLLTPKTTSSSPSPPPSSSPLLSCFSTKPRRHKTTPSSSSSSAVVVVVAEPTSTTTRSKSLVGTHEYLAPEVISGEGHGGEVDWWTLGVLLYELLYGITPFKGETNERTLRNIMKQPVRFPKTKMKERDDREEMKVVEDLIRKLLVKNPKKRMGSWMGAAEIKRHEFFEGVNWALIRWAGPPEVPPSGNYCRGFDLKKKGNSGVLVPKGRKEKERGNNNEAFRITSGGGHYHHFDYF 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g1757 488 SUPERFAMILY Protein kinase-like (PK-like) 68 433 IPR011009 -
Sto3g1757 488 Coils Coil 124 144 - -
Sto3g1757 488 MobiDBLite consensus disorder prediction 255 293 - -
Sto3g1757 488 ProSiteProfiles Protein kinase domain profile. 82 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto3g1757 488 CDD STKc_phototropin_like 81 437 - -
Sto3g1757 488 Gene3D Phosphorylase Kinase; domain 1 82 179 - -
Sto3g1757 488 SMART serkin_6 82 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto3g1757 488 Pfam Protein kinase domain 83 246 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto3g1757 488 Pfam Protein kinase domain 304 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto3g1757 488 MobiDBLite consensus disorder prediction 271 293 - -
Sto3g1757 488 PANTHER FLIPPASE KINASE 1-RELATED 7 488 - -
Sto3g1757 488 MobiDBLite consensus disorder prediction 30 50 - -
Sto3g1757 488 MobiDBLite consensus disorder prediction 1 59 - -
Sto3g1757 488 ProSitePatterns Serine/Threonine protein kinases active-site signature. 217 229 IPR008271 GO:0004672|GO:0006468
Sto3g1757 488 Gene3D Transferase(Phosphotransferase) domain 1 180 427 - -
Sto3g1757 488 PANTHER PROTEIN KINASE PINOID 2 7 488 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g1757 Sto-Chr3 13677078 13679561 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g1757 3 488 AGC Kinase Gene Family AT2G26700 48.276 1.56e-156 453
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Sto3g1757 Pkinase 4.1e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g1757 K08286 - jre:109006265 490.345
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g1757 3 13677078 13679561 Sto12g1068 12 6703040 6704729 CCT
Sto3g1757 3 13677078 13679561 Sto3g1757 3 13677078 13679561 ECH