Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g1706 ATGAGACTCTCCCTGGATGTGGCCAGGAGGTTCTTTGGCCTCCAGGACATGCTAGGGTTTGATAAAGCAAGCAAAACGGTGGAGTGGCTGCTCAGCCAGGCCAAATCACAAATCCACAACTTGGAGATGACACTACACTACAACAGCGGGTGGTCGACTTCCTCGACGACATCCTCGACGACGTCCACCACCACGACCGCGACGATGAATTGCTCGTCCTTGTCGGGGTTGGACGACGTGGCGGCAGATCCGTCGTCCACCACGGCGAGGAGAGTCAAGGTTTCTAGAAGGGCTCGGGTGCAAAGGGAGTCTAGGGCGAAGGCGAGGGAGAGGGCGAGGGAGCGGACGAGGGAGAAGATGACGATGAGGAGAAGGAAACTAATTACTACTATTACTAGTGCCGATGACGacgacggcggcggcggcggcgacaatggtggtggtggcggcaGATCGAAGCAGATCCcccaaaatattaatattgtgaAGAATAATATGaatcctcctccttcttctaaTTGCTTTGATGTGGGTGAAATATTAGAATCAGAATCTGATCAACAAGCAAGAGATGATCAGAAGAATCTATGGAGTGTACTgctagaagatgatgatgtggtgcCTATGATCAACAAATGGAGTTGGAGCCCATCCATGTACTTCAATTCACTCCATACCTCCGGACTCCTAATTCACGAAAGTCGTTTCAGTCCATGGGAGGCCTACTATATGACATCTAAGAGATTTTGA 750 0.432 MRLSLDVARRFFGLQDMLGFDKASKTVEWLLSQAKSQIHNLEMTLHYNSGWSTSSTTSSTTSTTTTATMNCSSLSGLDDVAADPSSTTARRVKVSRRARVQRESRAKARERARERTREKMTMRRRKLITTITSADDDDGGGGGDNGGGGGRSKQIPQNINIVKNNMNPPPSSNCFDVGEILESESDQQARDDQKNLWSVLLEDDDVVPMINKWSWSPSMYFNSLHTSGLLIHESRFSPWEAYYMTSKRF 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g1706 249 ProSiteProfiles R domain profile. 102 119 IPR017888 -
Sto3g1706 249 PANTHER TRANSCRIPTION FACTOR TCP18 1 130 - -
Sto3g1706 249 ProSiteProfiles TCP domain profile. 1 41 IPR017887 -
Sto3g1706 249 MobiDBLite consensus disorder prediction 76 155 - -
Sto3g1706 249 Pfam TCP family transcription factor 1 122 IPR017887 -
Sto3g1706 249 MobiDBLite consensus disorder prediction 99 132 - -
Sto3g1706 249 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 1 130 IPR005333 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g1706 Sto-Chr3 13120067 13121013 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g1706 1 139 TCP Transcription Factor Family AT3G18550 40.123 2.44e-21 90.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Sto3g1706 TCP 2.5e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g1706 - - gmx:100803395 95.5153