Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g1684 ATGGAGCCGATGGACATCATTGGAAAATCGAAGGAAGATGCATCGCTTCCtaaagAAAGTTATATTCGTAACATCTCTGGATGCCTTTTTGTACAAATAGCTCCATCAACAATGACGAAAATTATTAAAGAGATGTTACCCCGGGATGTTCGTGTTGCGAGAGATGCTCAAGATCTGTTGATTGAGTGTTGTGTAGAGTTTATAAACCTCCTTTCATCAGAGTCAAATGAAGTTTGTGGTAGAGAGGAGAAAAGGACAATTGCACCCGAGCATGTATTGAAGGCTTTACAGGTTCTTGGATTTGGTGAATATATTGAGGAAGTTTATGCAGCATATGAACACCACAAGATTGAGACCATGCAGGACTCATTAAAAGGAGCCAAGTGGAGTAATGGAACGGAGATGACAGAAGAACAAGCATTAGCAGAGCAGCAAAGGATGTTTGCTGAGGCACGTGCTAGAATGAATGGTGGGGCCATTGCTTCCAAACAGCCAGATGGTGACCAAAGTTTAGAGAgctaa 522 0.4138 MEPMDIIGKSKEDASLPKESYIRNISGCLFVQIAPSTMTKIIKEMLPRDVRVARDAQDLLIECCVEFINLLSSESNEVCGREEKRTIAPEHVLKALQVLGFGEYIEEVYAAYEHHKIETMQDSLKGAKWSNGTEMTEEQALAEQQRMFAEARARMNGGAIASKQPDGDQSLES 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g1684 173 PANTHER PROTEIN DR1 HOMOLOG 1 172 IPR044255 -
Sto3g1684 173 PANTHER PROTEIN DR1 HOMOLOG 1 172 - -
Sto3g1684 173 SUPERFAMILY Histone-fold 36 160 IPR009072 GO:0046982
Sto3g1684 173 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 36 96 IPR003958 -
Sto3g1684 173 Gene3D Histone, subunit A 31 160 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g1684 Sto-Chr3 12893833 12897116 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g1684 1 169 CCAAT-DR1 Transcription Factor Family AT5G23090 71.345 3.35e-85 246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Sto3g1684 CBFD_NFYB_HMF 2.2e-18 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g1684 K21751 - jre:109017784 274.248
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g1684 3 12893833 12897116 Sto3g1684 3 12893833 12897116 ECH