Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g1682 ATGGGAGGAGGTCAAAGGCGGAGGAGGAAGCACCACTTCAACAAAATCCACGCGTTCCGTTGCGGCGGCAAATCGTCGTTCCGCGAGGAGCATTCGCTGATTGGAGGGCCTGGATTCTCGCGGACGGTGGATTGCAACGGCGCCCATATCGGAGGGGACAACCGGTACTCCGACAATTACGTGCGGACTACTAAATACACGCTCGCCTCCTTCCTTCCGAAGTCCCTCTTCGAGCAATTCAGGAGAGTCGCCAACTTCTATTTCCTCGTCTGCGCCATCCTCTCCTTCTTCCCCGTCTCGCCCTACTCCGCCGTCAGCAATGTCGTCCCcctcgtcgtcgtcgtcgccgCCACCATGGCCAAAGAGGCCATCGAAGACTGGAAACGGAAACAGCAGGATATTGAGATGAATAACAGAAGTGTGAAGGTACATAGAGGAGAAGGTGTTTTTGATCATTCAAAATGGAGGGATTTGAGGGTTGGGAGCATAGTAAGAGTAGAAAAAGACGAATTCTTTCCTGCCGATCTCATCTTGCTCTCATCAAGCTACGAGGAAGCAATCTGCTACGTGGAAACCATGAATCTCGACGGAGAAACCAATCTCAAGCTGAAGCAAGCACTGGAAGAGACTTCGAAGCTGCAAGAGGATTCGAGCTTCCACCATTTCAAGGCCAAGATCAAATGCGAAGATCCAAACGCAAATCTGTACACTTTCGTGGGGACTCTCGAGATTGAAGACCAGCAATTCCCTCTCTCACCTCAGCAACTCCTCCTCAGGGATTCGAAGCTGAGGAACACAGATTTCATCTATGGAGTGGTGATCTTCACCGGCCATGACACGAAGGTGATGCAGAACTCGACCGAGCCGCCTTCCAAGAGAAGCAAAGTCGAGAAGCGTATGGACAAGATCATCTACTTCTTGTTCTCTGTCCTGGTCTTGATCTCCCTCATCGGCTCCATCGCCTTCGGGATCTCCACGATGGAAGACATCGACGAGAATGGGAGGTCCAAGAGATGGTACCTTAGACCGGACGACACCACGGTGTACTATGATCCGGACCGGGCAGCCGTCGCGGCCATCCTGCATTTCTTCACCGCGCTCATGTTGTACGGTTACTTCATCCCCATTTCCTTGTATGTGTCCATAGAGATTGTGAAGGTTCTTCAGAGCATTTTCATTAACCAAGATGTCCACATGTACCACGAGGAAACCGACAAGCCCGCGCACGCTCGGACCTCGAATTTGAACGAGGAATTAGGCCAAGTTGACACCATACTTTCAGACAAGACGGGGACTTTGACGTGTAATTCCATGGAGTTCATCAAGTGTTCCATTGCTGGGGTTGCTTATGGACGTGGGGTTACAGAAGTGGAGAGGGCTCTAGCAAGAAGGAAAGGGTTGGACATAGTGATAGATGATGAGGAGGAGCATGACCATAAGCCTTCTTCTGTTAAAGGGTTTAATTTTACTGATGAGAGGATTATGAATGGGAATTGGTTCAATGAGGCTAATCCGAATGAAATCCAGAAGTTTCTGAGATTGCTGGCTGTGTGCCATACTGCGGTGCCTGAAGTTGATGAGGAAACTGGTAGGGTCTTGTATGAGGCTGAATCACCAGACGAGGCGGCTTTTGTGATTGCTGCGAGAGAATTAGGGTTTGAGTTCTATGAAAGGACTCAGACGGCCATTGTGATACGCGAAACCTATAAACTCTTAAACATCATAGAATTCAGCAGTGCAAGAAAGAGGATGTCTGTAATTGTAAGAGACGACACGGGGAAACTACTTCTACTCTCCAAAGGCGCAGACAGTGTTATGTTTGAAAGACTTGCAAAGGATGGAAGGGTTTTCGAGGAGAAGACTAGGAAGCACGTCAACGAGTACGCCGACGCCGGTCTAAGGACATTGTTACTCGCGTATCGCGAGCTTGACGAGGAAGAATATAATCGATTTAATGAAGAATTCACGGAGGCGAAGAACACAGTTAGTGCACATAGGGAGGAGCTTATAGAGGAAGTAGCAGAGAAAATTGAGAAGGATCTAATTCTTCTTGGTGCCACTGCAGTTGAAGACAAACTTCAAAATGGGGTTCCTGAATGCATTGACAAGCTAGCACAGGCTGGAATTAAGCTATGGGTTTTGACTGGTGATAAGATGGAGACAGCAATTAATATTGGATTTGCTTGCAGTTTACTAAGACAAGGAATGAAGCAAATTATAATTAGCTCAGACACTCCTGAAATCAAATCACTAGAAAAAGCTGATGACAAGTCTGCTTCTGGAAAGgCAATCAAGGCAAGTGTGGTTAATCAGATAAAGGAAGGGAAGGATTTGCTTTCTAAATCAGATGAAAATTCGGAGGCTTTAGCTCTAATTATCGACGGAAAGTGTCTGGTTTATGCATTACACGATGATGTGAAGGACTCGTTTCTTGAACTTGCTATTGGCTGTGCTTCTGTTATATGCTGTCGTTCATCTCCCAAACAAAAAGCACTAGTTACAAGATTAGTTAAGGAAAAAACCGGTAGTACAACACTGGGGATCGGGGATGGAGCAAACGACGTCGGAATGCTCCAAGAAGCAGACATTGGAATTGGGATCAGCGGCGTTGAAGGAATGCAGGCAGTTATGTCAAGTGATATTGCGATTGCACAATTTCGGTTTCTAGAGCGCCTACTTCTGGTCCACGGACATTGGTGTTACAGAAGGATAACCAAAATGATTTGCTACTTCTTTTACAAGAACATTACGCTCGGCATCACTCTGTTCTTCTTTGAGATGTACGCGTCGTTCTCAGGACAAGCGGCGTACAACGATTGGTTCACGTCGCTGTACAATGTAATCTTCACATCACTTCCCGTGATTGCCTTGGGAGTGTTCGACAAGGATGTCTCTGCTAAACTATGTCTCAAGTTTCCCTTGCTATACCAAGAAGGCGTCCAAAACGTCCTCTTCAGCTGGAAAAGAATCCTTGGGTGGATACTAAACGCCGTcgtaacctccatcatcatcttcttcttctgcacCAAAGCCTTGGAGCACCAAGCCTTCCGGACCTCCGGCCAGGTCTCCGACCTCTCCGTCCTCGGCGCCACCATGTACACGTGCGTCGTCTGGGTCGTCAACTGCCAGTTGGCCCTATCCATCAGCTACTTCACCTACATCCAACACATCCTCATATGGGGAAGCATCCTCCTCTGGTACATCTTCCTCCTCGCCTATGGAGCCATGGACCCCACCCTCTCCACCACGGCCTACAAGGTCTTCGTCGAGGAGTGCGCCCCGTCCCCGTCGTACTGGTTCGTCACGCTGCTCGTGCTCTTCTCGGCGCTCGTCCCGTACTTCGCGTACTCCTCGGTGCAGATGAGGTTCTTCCCCATGTTTCACCAGATGATCCAGTGGATAAGGAACGACGGGCAGACTAGCGACCCGGAGTTCATCAACGTGGTGAGGAATAGGTCCATACGGCATACTACGGTAGGGTATACCGCCCGATTGGCCGCGTCGAGACGGGTGGCGGACGAGAAGAGTTAG 3534 0.4813 MGGGQRRRRKHHFNKIHAFRCGGKSSFREEHSLIGGPGFSRTVDCNGAHIGGDNRYSDNYVRTTKYTLASFLPKSLFEQFRRVANFYFLVCAILSFFPVSPYSAVSNVVPLVVVVAATMAKEAIEDWKRKQQDIEMNNRSVKVHRGEGVFDHSKWRDLRVGSIVRVEKDEFFPADLILLSSSYEEAICYVETMNLDGETNLKLKQALEETSKLQEDSSFHHFKAKIKCEDPNANLYTFVGTLEIEDQQFPLSPQQLLLRDSKLRNTDFIYGVVIFTGHDTKVMQNSTEPPSKRSKVEKRMDKIIYFLFSVLVLISLIGSIAFGISTMEDIDENGRSKRWYLRPDDTTVYYDPDRAAVAAILHFFTALMLYGYFIPISLYVSIEIVKVLQSIFINQDVHMYHEETDKPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGVAYGRGVTEVERALARRKGLDIVIDDEEEHDHKPSSVKGFNFTDERIMNGNWFNEANPNEIQKFLRLLAVCHTAVPEVDEETGRVLYEAESPDEAAFVIAARELGFEFYERTQTAIVIRETYKLLNIIEFSSARKRMSVIVRDDTGKLLLLSKGADSVMFERLAKDGRVFEEKTRKHVNEYADAGLRTLLLAYRELDEEEYNRFNEEFTEAKNTVSAHREELIEEVAEKIEKDLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMKQIIISSDTPEIKSLEKADDKSASGKAIKASVVNQIKEGKDLLSKSDENSEALALIIDGKCLVYALHDDVKDSFLELAIGCASVICCRSSPKQKALVTRLVKEKTGSTTLGIGDGANDVGMLQEADIGIGISGVEGMQAVMSSDIAIAQFRFLERLLLVHGHWCYRRITKMICYFFYKNITLGITLFFFEMYASFSGQAAYNDWFTSLYNVIFTSLPVIALGVFDKDVSAKLCLKFPLLYQEGVQNVLFSWKRILGWILNAVVTSIIIFFFCTKALEHQAFRTSGQVSDLSVLGATMYTCVVWVVNCQLALSISYFTYIQHILIWGSILLWYIFLLAYGAMDPTLSTTAYKVFVEECAPSPSYWFVTLLVLFSALVPYFAYSSVQMRFFPMFHQMIQWIRNDGQTSDPEFINVVRNRSIRHTTVGYTARLAASRRVADEKS 1177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g1682 1177 PRINTS P-type cation-transporting ATPase superfamily signature 426 440 - -
Sto3g1682 1177 PRINTS P-type cation-transporting ATPase superfamily signature 734 744 - -
Sto3g1682 1177 PRINTS P-type cation-transporting ATPase superfamily signature 848 867 - -
Sto3g1682 1177 Gene3D - 533 684 IPR023299 GO:0000166
Sto3g1682 1177 SFLD p-type atpase 408 899 IPR044492 -
Sto3g1682 1177 CDD P-type_ATPase_APLT_Dnf-like 58 1008 - -
Sto3g1682 1177 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 483 686 IPR023299 GO:0000166
Sto3g1682 1177 SUPERFAMILY Calcium ATPase, transduction domain A 139 285 IPR008250 -
Sto3g1682 1177 SUPERFAMILY Calcium ATPase, transmembrane domain M 55 1126 IPR023298 -
Sto3g1682 1177 SUPERFAMILY HAD-like 421 903 IPR036412 -
Sto3g1682 1177 Pfam Phospholipid-translocating ATPase N-terminal 53 106 IPR032631 -
Sto3g1682 1177 Gene3D - 685 888 IPR023214 -
Sto3g1682 1177 Gene3D - 104 287 - -
Sto3g1682 1177 Coils Coil 641 668 - -
Sto3g1682 1177 SFLD C1.7: P-type atpase like 408 899 - -
Sto3g1682 1177 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 5 1172 - -
Sto3g1682 1177 ProSitePatterns E1-E2 ATPases phosphorylation site. 428 434 IPR018303 -
Sto3g1682 1177 Pfam Cation transport ATPase (P-type) 517 610 - -
Sto3g1682 1177 Pfam Phospholipid-translocating P-type ATPase C-terminal 876 1126 IPR032630 -
Sto3g1682 1177 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 814 931 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Sto3g1682 1177 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 56 1133 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Sto3g1682 1177 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 5 1172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g1682 Sto-Chr3 12870621 12878308 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g1682 1 1171 Primary Pumps ATPases AT3G25610 69.840 0.0 1749
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g1682 K01530 K14802 gmx:100797039 1904.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g1682 3 12870621 12878308 Sto12g1019 12 6330212 6334876 ECH
Sto3g1682 3 12870621 12878308 Sto3g1682 3 12870621 12878308 ECH