Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g1665 ATGTGTTCGGTTAAAAATTGCGCGATCCAAGAACGAAAGGAAATCgagagagagagagaggccaAGAGCGCGAGAAACAAacgaagaaagaagaagaaggagaagaagaagatggggtGCTCATTCTCTGGTTTGAATGCACTGTACGACAATGTCAATGCGGCAGCAGATGTGTGGATCAACGAGAACCGATTCCGCGTCGTCAGGCAGCTCGGCGAAGGTGGCTTCTCCTACGTCTACTTGGTCAAGGAGGTGCCCACCGACTCTCCTGACGGTGGCCTCTCCAAGAAGCTCAAAGACTCCTCCCTTCTCTCTGGTTCGATTCCTGATCTGGATTCTTTTTTATTCGAATTTCAAACTACATTGTCTTATTCCGATGCCTTTGCTCTAGATTATGATGGGACTTATGCTATGAAAAAGGTCCTCATTCAAAACAATGAACAGCTGGAGTTGGTGAAGGAGGAAATCCGTGTTTCATCACTGTTCAGTCATCCAAATCTGCTTCCACTTCTTGATCATGCAATCATTTCTGTTAAGCCTACCAAAGAAACATCTTGGAACCATGAAGCATACTTGTTATTTCCTGTTCATTTGGATGGAACATTGCTAGACATAGCCCAAACTATGAAAGCAAAGAAAGAGTTCTTTTCTACATCAGATGTGCTTCAAATATTTCGGCAGCTTGCTGCAGGACTCAAGCACATGCACAGTTTAGATCCTCCACATGCACATAATGATGTCAAACCTGGTAATGTTGTTATAACAAACAGAAAAGGACAACCACCACTTGCCATACTGATGGATTTTGGCAGTGCGCGACCTGCCAGGAGGCAAATTCGCACTCGATCAGAGGCACTACAGTTACAGgaaTGGGCATCTGAACATTGCTCTGCTCCTTTCCGAGCTCCTGAGCTATGGGATTGCCCAAGCAATGCTGATATAGATGAGAGGACTGATATTTGGTCACTAGGATGCACACTGTATGGGGTATCTCCATTTGAATATGCACTTGGAGAATCTGGAGGAAGCCTGCAATTGGCCATTGTAAATGCTCAAATCAAATGGCCTACTGGACCTAAGTCTCCATATCCAGAAGCTCTTCATCAATTTGTGACATGGATGCTTCAGCCTCAGGCAGCCGTGCGACCCCGGATAGACGATATTGTTATCCACGTTGACAAGTTGATTGCCAAATTCTCTCAGTGA 1206 0.4287 MCSVKNCAIQERKEIEREREAKSARNKRRKKKKEKKKMGCSFSGLNALYDNVNAAADVWINENRFRVVRQLGEGGFSYVYLVKEVPTDSPDGGLSKKLKDSSLLSGSIPDLDSFLFEFQTTLSYSDAFALDYDGTYAMKKVLIQNNEQLELVKEEIRVSSLFSHPNLLPLLDHAIISVKPTKETSWNHEAYLLFPVHLDGTLLDIAQTMKAKKEFFSTSDVLQIFRQLAAGLKHMHSLDPPHAHNDVKPGNVVITNRKGQPPLAILMDFGSARPARRQIRTRSEALQLQEWASEHCSAPFRAPELWDCPSNADIDERTDIWSLGCTLYGVSPFEYALGESGGSLQLAIVNAQIKWPTGPKSPYPEALHQFVTWMLQPQAAVRPRIDDIVIHVDKLIAKFSQ 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g1665 401 CDD STKc_16 64 397 - -
Sto3g1665 401 PANTHER - 38 105 - -
Sto3g1665 401 PANTHER - 124 400 - -
Sto3g1665 401 ProSiteProfiles Protein kinase domain profile. 65 396 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto3g1665 401 Pfam Protein kinase domain 131 391 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto3g1665 401 Coils Coil 5 32 - -
Sto3g1665 401 Gene3D Transferase(Phosphotransferase) domain 1 198 399 - -
Sto3g1665 401 MobiDBLite consensus disorder prediction 16 37 - -
Sto3g1665 401 Gene3D Phosphorylase Kinase; domain 1 17 195 - -
Sto3g1665 401 SMART serkin_6 65 396 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto3g1665 401 PANTHER SERINE/THREONINE-PROTEIN KINASE 16 38 105 - -
Sto3g1665 401 PANTHER SERINE/THREONINE-PROTEIN KINASE 16 124 400 - -
Sto3g1665 401 SUPERFAMILY Protein kinase-like (PK-like) 57 391 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g1665 Sto-Chr3 12708286 12713004 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g1665 135 354 EF-hand Containing Proteins AT4G04710 27.632 1.71e-10 60.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NAK Sto3g1665 Pkinase 4.7e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g1665 K08856 - gmx:100803659 590.882
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g1665 3 12708286 12713004 Sto3g1665 3 12708286 12713004 ECH