Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g1664 ATGCGAGCGTGCGACACGTGCAAGCTCTCTCCTTCCGCCGTTTACTGCCACACCCACTCCGCCTTCCTCTGCTCTCCTTGCGATGCCCACTCCCACGCGCcccaccgccaccaccaccgTCACCACCATCGCGTCCCCCTCTGTGAAGCGTGCGAGCACGCGCCTTCCGCGTTCACGTGCAACGCCGACGCCGCCTCCCTCTGCGTCACATGCGACTTCCACGTTCACGCCGCCAACTCCATCGCCGGCCGCCACCGCCGCCTCCCCGTCCCTCCCCTCCCCGAGGCGGCAGATCAGGCGGAGGTGGAGCGGGAAATTGATTCGTGGTTGATGCTCAACGGCGACGGcggcgacgacgacgacgatatTGATGACGTCACCAAGCAATCTTCCGTATTATTAGGAAACAGTAGTAGTACTGCTACGACTACGGAAGATGATACTGATCATAATAGTGTTGTGCCAACTATATCGGAGGCACGTGACCAGCAGAataggatgatgatgatgatgatgatggagcaTCACAAACCGCCCCTTATTAATTACCATCCCTCTTATTTACGGATGAGTGTCCCTCTGCCCTTTGACATCTCAAGCTACAAGTTTGGTAGAGGAATCCAGATATTTCCAAATGGTCCTTCAGTTTCTTCATTATTAATGCAGCCCCATATGATGATGAAGAGGAAGGAAGGAGTCCTAAAAtacagagagaagaagaaatcaaGAAAGTTTGAGAAGAGAATAAGATATGCTTATAGGAAAGCCTACGCTGAGAAACGTCCTAGAGTTAAGGGCAGGTTTGTAAAAACACAAGACCTAACCTCACACTCTTAA 837 0.4683 MRACDTCKLSPSAVYCHTHSAFLCSPCDAHSHAPHRHHHRHHHRVPLCEACEHAPSAFTCNADAASLCVTCDFHVHAANSIAGRHRRLPVPPLPEAADQAEVEREIDSWLMLNGDGGDDDDDIDDVTKQSSVLLGNSSSTATTTEDDTDHNSVVPTISEARDQQNRMMMMMMMEHHKPPLINYHPSYLRMSVPLPFDISSYKFGRGIQIFPNGPSVSSLLMQPHMMMKRKEGVLKYREKKKSRKFEKRIRYAYRKAYAEKRPRVKGRFVKTQDLTSHS 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g1664 278 ProSiteProfiles Zinc finger B-box type profile. 43 90 IPR000315 GO:0008270
Sto3g1664 278 SMART bboxneu5 43 90 IPR000315 GO:0008270
Sto3g1664 278 SMART bboxneu5 1 40 IPR000315 GO:0008270
Sto3g1664 278 CDD Bbox1_BBX-like 47 90 - -
Sto3g1664 278 Pfam CCT motif 229 271 IPR010402 GO:0005515
Sto3g1664 278 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Sto3g1664 278 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 2 274 IPR045281 GO:0009909
Sto3g1664 278 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 1 2 274 - -
Sto3g1664 278 MobiDBLite consensus disorder prediction 131 152 - -
Sto3g1664 278 ProSiteProfiles CCT domain profile. 229 271 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g1664 Sto-Chr3 12699936 12702695 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g1664 2 270 C2C2-CO-like Transcription Factor Family AT3G02380 37.013 1.15e-50 168
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-CO-like Sto3g1664 CCT 7.3e-16 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g1664 - - gmx:100301885 156.377