Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g1659 ATGGAGACCAATAACACAACCTTAAACCATCATCCTCTTCTTCACAATATTCCTTATCCAACTCATAAAAAACCCATTTTGACCTCAAGCTTAGTGAATTCAAGTGAAGGCCATGAAGGTTCAATCTATCTTCCATTTTACTACTCTCAACTTCACCTTCCCAACAGTAATCCTCCAATTCACTTCATAGACAACAAAACCTCCCCAAACACATCATCTaacagcaacaacaacaacaacatcaaCAACAACCTTAATGATTGTGTTGGTGATCTAGCAGCAAAGGATGATGTTGTTGTGGTTGatgacaagaagaagaagaggatgttcTCCAACCGAGAATCGGCTCGGAGATCGAGGATGAGGAAGAAGCAGCAGATAGAGAATCTCCAGTACCAAGTGGATCATCTTCAGGACATGAATCATCAACTTTCTCAGAAGATCATTTACTTGTTGGAATGTAACCAGCAGATTATACAGCAGAATGGACAGCTAAAAGACAAAGTTTCTTCACTTCAAGGGGCAATCTCTGACTTGCTTCTTCCTCtgtctcatcatcatcatcatcatcaaaataTCCCCATTAATGGTCTCTTCACTCAGCCTTCTTCAGCTCCACCAGTTACTTCTTCTGGAGCATAG 642 0.3614 METNNTTLNHHPLLHNIPYPTHKKPILTSSLVNSSEGHEGSIYLPFYYSQLHLPNSNPPIHFIDNKTSPNTSSNSNNNNNINNNLNDCVGDLAAKDDVVVVDDKKKKRMFSNRESARRSRMRKKQQIENLQYQVDHLQDMNHQLSQKIIYLLECNQQIIQQNGQLKDKVSSLQGAISDLLLPLSHHHHHHQNIPINGLFTQPSSAPPVTSSGA 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g1659 213 CDD bZIP_plant_GBF1 108 153 IPR045314 GO:0003700|GO:0006355
Sto3g1659 213 PANTHER BASIC LEUCINE-ZIPPER 70-RELATED 54 196 - -
Sto3g1659 213 Pfam bZIP transcription factor 103 158 IPR004827 GO:0003700|GO:0006355
Sto3g1659 213 MobiDBLite consensus disorder prediction 194 213 - -
Sto3g1659 213 Coils Coil 113 147 - -
Sto3g1659 213 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 107 122 IPR004827 GO:0003700|GO:0006355
Sto3g1659 213 SUPERFAMILY Leucine zipper domain 104 160 IPR046347 GO:0003700|GO:0006355
Sto3g1659 213 MobiDBLite consensus disorder prediction 62 82 - -
Sto3g1659 213 MobiDBLite consensus disorder prediction 193 213 - -
Sto3g1659 213 SMART brlzneu 100 164 IPR004827 GO:0003700|GO:0006355
Sto3g1659 213 PANTHER BASIC LEUCINE ZIPPER 43-RELATED 54 196 IPR044521 -
Sto3g1659 213 Gene3D - 103 156 - -
Sto3g1659 213 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 102 151 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g1659 Sto-Chr3 12639482 12640123 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g1659 47 211 bZIP Transcription Factor Family AT5G60830 39.286 6.18e-30 108
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Sto3g1659 bZIP_1 2.2e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g1659 - - aprc:113874797 171.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g1005 12 6251429 6253701 Sto3g1659 3 12639482 12640123 CCT