Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g1639 ATGGAGTCCATCAGGCTATCGGTTACTGGATCCGTTACCTCCCGTTGTGGCTTCGCGATCTTACTCGTCTTGATCTTCTCTTGCTCCACATTCACTTCTACagAAGCCTATGATGCACTTGATCCAAATGGAAACATAACTCTCAAATGGGACGTCATGAGCTGGACTCCAGATGGCTATGTTGCTGTTGTTACAATGTACAACTTTCAGCAGTATCGGCACATTCAGGCCCCAGGGTGGACGTTAGGGTGGACATGGGCtaaaaaggaagtgatttggAGCATGATGGGAGCCCAAACCACAGAGCAAGGTGACTGCTCAAAGTTCAAAGGGAATGTCCCACATTGCTGCAAGAAGGATCCAACTGTGGTGGATCTTCTTCCCGGTACTCCTTACAATCAGCAGATTGCAAATTGCTGTAAGGGTGGAGTATTGAACTCATGGGGTCAGGACCCAGCCAATGCAGTTGGTTCATTTCAGGTCAGTGTTGGTGCTGCTGGAACAACCAACAGAACTGTGAAGTTGCCAAAAAATTTCACCCTCAAAGCACCAGGACCTGGATACACTTGTGGTCCGGCAAAGATTGTGAGGCCAACTCAGTTTGTCACCAATGACAAAAGGAGAACCACTCAAGCATTGATGACCTGGAATATTACCTGCACATATTCTCAATTCCTTGCTCAAAAGACACCAACATGCTGTGTTTCCCTCTCATCCTTCTATAACGATTCTATAGTAAACTGCCCAACCTGCACATGTGGCTGTCAAAACAAAACGGAACCTGGAAGCTGTGTAAATCCAGACACCCCACATTTAGCCTCAGTTGTATCATCCTCAGGCAAAGCTAGTAATACACCTCTGGTCCAGTGCACTAGCCATATGTGTCCGATTCGTGTGCATTGGCATGTGAAAGTCAATTATAAAGAGTACTGGCGAGTAAAGATTACAATCACAAATTTCAATTACAGGATGAATTATTCACAATGGAACCTCGTTGTGCAGCACCCCAATTTTGACAATCTGACCCAGCTTTTCAGCTTTAAGTACAAGTCATTAACACCTTACGATGGATTAAATGACACTGGGATGCTATGGGGAGTCCAATTCTACAACGATTTCCTTTCTTCAGCTGGAGAAATGGGGAATGTGCAATCAGAGATCTTATTCAGAAAAGACGCATCAACCTTCACATTGGATAAGGGTTGGGCTTTCCCCAGAAGAATCTATTTCAATGGGGATAACTGTGTCATGCCTCCTCCAGATTCCTACCCGTGGCTGCCAAACGCAACTTCAAAATCAGTCTTCTCCCTTCTTGCTTCGGCCATAGCCACCTTCGTCTCTCTGGCAATCTTGTTGGCCAACATATAG 1368 0.4496 MESIRLSVTGSVTSRCGFAILLVLIFSCSTFTSTEAYDALDPNGNITLKWDVMSWTPDGYVAVVTMYNFQQYRHIQAPGWTLGWTWAKKEVIWSMMGAQTTEQGDCSKFKGNVPHCCKKDPTVVDLLPGTPYNQQIANCCKGGVLNSWGQDPANAVGSFQVSVGAAGTTNRTVKLPKNFTLKAPGPGYTCGPAKIVRPTQFVTNDKRRTTQALMTWNITCTYSQFLAQKTPTCCVSLSSFYNDSIVNCPTCTCGCQNKTEPGSCVNPDTPHLASVVSSSGKASNTPLVQCTSHMCPIRVHWHVKVNYKEYWRVKITITNFNYRMNYSQWNLVVQHPNFDNLTQLFSFKYKSLTPYDGLNDTGMLWGVQFYNDFLSSAGEMGNVQSEILFRKDASTFTLDKGWAFPRRIYFNGDNCVMPPPDSYPWLPNATSKSVFSLLASAIATFVSLAILLANI 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g1639 455 PIRSF COBRA 9 455 IPR006918 GO:0010215|GO:0031225
Sto3g1639 455 PANTHER PROTEIN COBRA 10 452 IPR006918 GO:0010215|GO:0031225
Sto3g1639 455 Pfam COBRA-like protein 60 223 IPR006918 GO:0010215|GO:0031225
Sto3g1639 455 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 28 - -
Sto3g1639 455 PANTHER COBRA-LIKE PROTEIN 10 452 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g1639 Sto-Chr3 12370592 12373866 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g1639 48 440 COBRA Gene Family AT5G60920 82.323 0.0 707
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g1639 - - gmx:100815779 843.188
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g1639 3 12370592 12373866 Sto3g1639 3 12370592 12373866 ECH